TT-seq maps the human transient transcriptome (Q34529467)

2 August 2017

TT-seq maps the human transient transcriptome (English)

1 reference

2 August 2017

0 references

Julien Gagneur

7

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Björn Schwalb

object named as

Björn Schwalb

1

0 references

Patrick Cramer

8

object named as

Patrick Cramer

1 reference

2 August 2017

Margaux Michel

2

1 reference

2 August 2017

Benedikt Zacher

3

1 reference

2 August 2017

Katja Frühauf

4

1 reference

2 August 2017

Carina Demel

5

1 reference

2 August 2017

Achim Tresch

6

1 reference

2 August 2017

language of work or name

English

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publication date

1 June 2016

1 reference

2 August 2017

1 reference

2 August 2017

352

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2 August 2017

1225-1228

1 reference

2 August 2017

6290

1 reference

Dealing with pervasive transcription.

2 August 2017

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD9841

An atlas of active enhancers across human cell types and tissues

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD9841

Analysis of nascent RNA identifies a unified architecture of initiation regions at mammalian promoters and enhancers

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD9841

CAGE: cap analysis of gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD9841

Precise maps of RNA polymerase reveal how promoters direct initiation and pausing

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD9841

Native elongating transcript sequencing reveals human transcriptional activity at nucleotide resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD9841

Mammalian NET-Seq Reveals Genome-wide Nascent Transcription Coupled to RNA Processing

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD9841

Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD9841

GENCODE: the reference human genome annotation for The ENCODE Project

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD9841

Landscape of transcription in human cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD9841

Widespread transcription at neuronal activity-regulated enhancers

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD9841

An integrated encyclopedia of DNA elements in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD9841

Antisense RNA polymerase II divergent transcripts are P-TEFb dependent and substrates for the RNA exosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD9841

High-resolution sequencing and modeling identifies distinct dynamic RNA regulatory strategies

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD9841

U1 snRNP protects pre-mRNAs from premature cleavage and polyadenylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD9841

U1 snRNP determines mRNA length and regulates isoform expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD9841

Promoter directionality is controlled by U1 snRNP and polyadenylation signals

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD9841

Human 5' --> 3' exonuclease Xrn2 promotes transcription termination at co-transcriptional cleavage sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD9841

The yeast Rat1 exonuclease promotes transcription termination by RNA polymerase II.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD9841

Q&A: A lateral thinker. Interview by Diane Wu.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD9841

High-resolution gene expression profiling for simultaneous kinetic parameter analysis of RNA synthesis and decay

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD9841

Mapping RNA-seq Reads with STAR

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD9841

Fast gapped-read alignment with Bowtie 2

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD9841

The Sequence Alignment/Map format and SAMtools

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD9841

Differential expression analysis for sequence count data

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD9841

HTSeq--a Python framework to work with high-throughput sequencing data

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD9841

Transcript mapping with high-density oligonucleotide tiling arrays.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD9841

Evaluation of statistical methods for normalization and differential expression in mRNA-Seq experiments

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD9841

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD9841

Dynamic transcriptome analysis measures rates of mRNA synthesis and decay in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD9841

21 January 2018

ViennaRNA Package 2.0

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD9841

Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD9841

Variance stabilization applied to microarray data calibration and to the quantification of differential expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD9841

A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD9841

Genomic organization of human transcription initiation complexes

21 January 2018

1 reference

30 December 2023

https://opencitations.net/index/api/v1/citations/10.1038/NATURE12535

Identifiers

DOI

10.1126/SCIENCE.AAD9841

1 reference

2 August 2017

0 references

1 reference