phi29 DNA polymerase residue Ser122, a single-stranded DNA ligand for 3'-5' exonucleolysis, is required to interact with the terminal protein (Q34476792)

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English	phi29 DNA polymerase residue Ser122, a single-stranded DNA ligand for 3'-5' exonucleolysis, is required to interact with the terminal protein	scientific article

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scholarly article

1 reference

Europe PubMed Central

2 August 2017

phi29 DNA polymerase residue Ser122, a single-stranded DNA ligand for 3'-5' exonucleolysis, is required to interact with the terminal protein (English)

1 reference

Europe PubMed Central

2 August 2017

Margarita Salas

3

object named as

Salas M

1 reference

Europe PubMed Central

2 August 2017

author name string

de Vega M

1

1 reference

Europe PubMed Central

2 August 2017

Blanco L

2

1 reference

Europe PubMed Central

2 August 2017

language of work or name

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publication date

1 October 1998

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Europe PubMed Central

2 August 2017

Journal of Biological Chemistry

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Europe PubMed Central

2 August 2017

273

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Europe PubMed Central

2 August 2017

44

1 reference

Europe PubMed Central

2 August 2017

28966-28977

1 reference

Europe PubMed Central

2 August 2017

Protein-priming of DNA replication

1 reference

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Initiation of phi 29 DNA replication occurs at the second 3' nucleotide of the linear template: a sliding-back mechanism for protein-primed DNA replication.

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Protein-primed DNA replication: a transition between two modes of priming by a unique DNA polymerase

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Relating structure to function in phi29 DNA polymerase

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The molecular mechanism of inhibition of alpha-type DNA polymerases by N2-(butylphenyl)dGTP and 2-(butylanilino)dATP: variation in susceptibility to polymerization

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A general structure for DNA-dependent DNA polymerases.

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Compilation, alignment, and phylogenetic relationships of DNA polymerases

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The highly conserved amino acid sequence motif Tyr-Gly-Asp-Thr-Asp-Ser in alpha-like DNA polymerases is required by phage phi 29 DNA polymerase for protein-primed initiation and polymerization

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Primer terminus stabilization at the phi 29 DNA polymerase active site. Mutational analysis of conserved motif KXY.

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Eukaryotic DNA polymerase amino acid sequence required for 3'----5' exonuclease activity

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Cocrystal structure of an editing complex of Klenow fragment with DNA

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Genetic and crystallographic studies of the 3',5'-exonucleolytic site of DNA polymerase I.

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Pre-steady-state kinetic analysis of processive DNA replication including complete characterization of an exonuclease-deficient mutant

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DNA polymerization in the absence of exonucleolytic proofreading: in vivo and in vitro studies

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Construction and characterization of a bacteriophage T4 DNA polymerase deficient in 3'-->5' exonuclease activity

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Functional consequences and exonuclease kinetic parameters of point mutations in bacteriophage T4 DNA polymerase

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Polymerization activity of an alpha-like DNA polymerase requires a conserved 3'-5' exonuclease active site

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Mutations within conserved motifs in the 3'-5' exonuclease domain of herpes simplex virus DNA polymerase

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Herpes simplex virus type 1 DNA polymerase. Mutational analysis of the 3'-5'-exonuclease domain

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Purification and properties of wild-type and exonuclease-deficient DNA polymerase II from Escherichia coli

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Family A and family B DNA polymerases are structurally related: evolutionary implications

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Cloning of thermostable DNA polymerases from hyperthermophilic marine Archaea with emphasis on Thermococcus sp. 9 degrees N-7 and mutations affecting 3'-5' exonuclease activity

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Isolation and characterization of ten mutator alleles of the mitochondrial DNA polymerase-encoding MIP1 gene from Saccharomyces cerevisiae.

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Mutants in the Exo I motif of Escherichia coli dnaQ: defective proofreading and inviability due to error catastrophe

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Localization of the exonuclease and polymerase domains of Bacillus subtilis DNA polymerase III

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The 3'-5' exonuclease site of DNA polymerase III from gram-positive bacteria: definition of a novel motif structure.

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Crystal structures of an NH2-terminal fragment of T4 DNA polymerase and its complexes with single-stranded DNA and with divalent metal ions

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Crystal structure of a pol alpha family replication DNA polymerase from bacteriophage RB69

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An invariant lysine residue is involved in catalysis at the 3'-5' exonuclease active site of eukaryotic-type DNA polymerases.

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Mutational analysis of phi29 DNA polymerase residues acting as ssDNA ligands for 3'-5' exonucleolysis

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Effects of internal deletions on the priming activity of the phage phi 29 terminal protein

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Overproduction and purification of protein P6 of Bacillus subtilis phage phi 29: role in the initiation of DNA replication

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Characterization of the phage phi 29 protein p5 as a single-stranded DNA binding protein. Function in phi 29 DNA-protein p3 replication

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Physical map of bacteriophage phi29 DNA.

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Initiation of phage phi 29 DNA replication in vitro: formation of a covalent complex between the terminal protein, p3, and 5'-dAMP.

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Terminal protein-primed DNA amplification

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An RNA polymerase II transcription factor binds to an upstream element in the adenovirus major late promoter.

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Phi 29 DNA polymerase requires the N-terminal domain to bind terminal protein and DNA primer substrates

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Structure of large fragment of Escherichia coli DNA polymerase I complexed with dTMP

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Structure of DNA polymerase I Klenow fragment bound to duplex DNA

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Crystal structure of Thermus aquaticus DNA polymerase

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Structure of Taq polymerase with DNA at the polymerase active site

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Crystal structure of a thermostable Bacillus DNA polymerase I large fragment at 2.1 A resolution

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Visualizing DNA replication in a catalytically active Bacillus DNA polymerase crystal

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Crystal structure of a bacteriophage T7 DNA replication complex at 2.2 A resolution

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The linear plasmid pMC3-2 from Morchella conica is structurally related to adenoviruses

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Functional characterization of the genes coding for the terminal protein and DNA polymerase from bacteriophage GA-1. Evidence for a sliding-back mechanism during protein-primed GA-1 DNA replication

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Effect of aphidicolin and nucleotide analogs on the phage phi 29 DNA polymerase

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A conserved 3'----5' exonuclease active site in prokaryotic and eukaryotic DNA polymerases

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Structure-function analysis of 3'-->5'-exonuclease of DNA polymerases

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Purification of bacteriophage phi 29 DNA polymerase

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A crystallographic study of the complex of phosphoramidon with thermolysin. A model for the presumed catalytic transition state and for the binding of extended substances

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Identifiers

10.1074/JBC.273.44.28966

1 reference

Europe PubMed Central

2 August 2017

1 reference

Europe PubMed Central

2 August 2017

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