Gene expression and molecular evolution (Q34420781)

2 August 2017

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title

Gene expression and molecular evolution (English)

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2 August 2017

Akashi H

1

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2 August 2017

1 December 2001

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Current Opinion in Genetics & Development

2 August 2017

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2 August 2017

11

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2 August 2017

660-666

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2 August 2017

6

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2 August 2017

Non-Darwinian Evolution

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https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Preponderance of synonymous changes as evidence for the neutral theory of molecular evolution

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https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Evolutionary Rate at the Molecular Level

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https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Darwinian Evolution of Proteins

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https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Non-Darwinian Evolution: A Critique

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https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Codon usage: mutational bias, translational selection, or both?

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Translational selection and molecular evolution

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Levels of tRNAs in bacterial cells as affected by amino acid usage in proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Studies of codon usage and tRNA genes of 18 unicellular organisms and quantification of Bacillus subtilis tRNAs: gene expression level and species-specific diversity of codon usage based on multivariate analysis

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Translational accuracy and the fitness of bacteria

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https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Codon catalog usage is a genome strategy modulated for gene expressivity

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Preferential codon usage in prokaryotic genes: the optimal codon-anticodon interaction energy and the selective codon usage in efficiently expressed genes

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Codon usage in bacteria: correlation with gene expressivity

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes: A proposal for a synonymous codon choice that is optimal for the E. coli translational system

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

The current excitement in bioinformatics-analysis of whole-genome expression data: how does it relate to protein structure and function?

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

A genome-wide transcriptional analysis of the mitotic cell cycle

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Dissecting the regulatory circuitry of a eukaryotic genome

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https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

A sampling of the yeast proteome

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https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Correlation between protein and mRNA abundance in yeast

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https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Relationship of codon bias to mRNA concentration and protein length in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

1 reference

7 January 2021

Genome-wide expression monitoring in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Expression pattern and, surprisingly, gene length shape codon usage in Caenorhabditis, Drosophila, and Arabidopsis.

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Codon usage and gene function are related in sequences of Arabidopsis thaliana

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https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Codon usage in Caenorhabditis elegans: delineation of translational selection and mutational biases

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Codon usage bias and tRNA abundance in Drosophila

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

tRNA gene number and codon usage in the C. elegans genome are co-adapted for optimal translation of highly expressed genes

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Recent selection on synonymous codon usage in Drosophila.

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

The frequency distribution of nucleotide variation in Drosophila simulans

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Does recombination improve selection on codon usage? Lessons from nematode and fly complete genomes

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Models of nearly neutral mutations with particular implications for nonrandom usage of synonymous codons.

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Asymmetries generated by transcription-coupled repair in enterobacterial genes.

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Deamination as the basis of strand-asymmetric evolution in transcribed Escherichia coli sequences

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Transcription-induced mutations: increase in C to T mutations in the nontranscribed strand during transcription in Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Association of increased spontaneous mutation rates with high levels of transcription in yeast

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

A test of translational selection at 'silent' sites in the human genome: base composition comparisons in alternatively spliced genes.

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Gene length and codon usage bias in Drosophila melanogaster, Saccharomyces cerevisiae and Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Analysis of the yeast transcriptome with structural and functional categories: characterizing highly expressed proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Genome-wide analysis relating expression level with protein subcellular localization

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Synonymous codon usage, accuracy of translation, and gene length in Caenorhabditis elegans.

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Synonymous codon bias is related to gene length in Escherichia coli: selection for translational accuracy?

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Determinants of substitution rates in mammalian genes: expression pattern affects selection intensity but not mutation rate

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Strong evolutionary conservation of broadly expressed protein isoforms in the troponin I gene family and other vertebrate gene families.

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Functional constraints against variations on molecules from the tissue level: slowly evolving brain-specific genes demonstrated by protein kinase and immunoglobulin supergene families

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Solvent accessibility and purifying selection within proteins of Escherichia coli and Salmonella enterica.

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

On the conservation of protein sequences in evolution

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

A mutation data matrix for transmembrane proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Selective constraints, amino acid composition, and the rate of protein evolution

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Transfer RNA gene redundancy and translational selection in Saccharomyces cerevisiae.

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Hydrophobicity, expressivity and aromaticity are the major trends of amino-acid usage in 999 Escherichia coli chromosome-encoded genes

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

Codon usage in plastid genes is correlated with context, position within the gene, and amino acid content.

1 reference

https://api.crossref.org/works/10.1016%2FS0959-437X%2800%2900250-1

7 January 2021

10.1016/S0959-437X(00)00250-1

Identifiers

DOI

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2 August 2017

1 reference

PubMed ID

11682310