Mapping of six somatic linker histone H1 variants in human breast cancer cells uncovers specific features of H1.2. (Q34400888)

1 August 2017

Mapping of six somatic linker histone H1 variants in human breast cancer cells uncovers specific features of H1.2. (English)

1 reference

1 August 2017

8

1 reference

1 August 2017

Albert Jordan

9

0 references

author name string

Lluís Millán-Ariño

1

1 reference

1 August 2017

Abul B M M K Islam

2

1 reference

1 August 2017

Andrea Izquierdo-Bouldstridge

3

1 reference

1 August 2017

Regina Mayor

4

1 reference

1 August 2017

Jean-Michel Terme

5

1 reference

1 August 2017

Neus Luque

6

1 reference

1 August 2017

Mónica Sancho

7

1 reference

1 August 2017

language of work or name

English

0 references

publication date

29 January 2014

1 reference

1 August 2017

Nucleic Acids Research

1 reference

1 August 2017

42

1 reference

1 August 2017

7

1 reference

1 August 2017

4474-4493

1 reference

Creative Commons Attribution 3.0 Unported

1 August 2017

start time

10 November 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

limma

1 reference

22 June 2022

https://europepmc.org/article/PMC/3985652

inferred from PubMed Central ID database lookup

cites work

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CDK2-dependent activation of PARP-1 is required for hormonal gene regulation in breast cancer cells.

6 July 2018

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A high-throughput chromatin immunoprecipitation approach reveals principles of dynamic gene regulation in mammals

6 July 2018

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Histone modifications and lamin A regulate chromatin protein dynamics in early embryonic stem cell differentiation

6 July 2018

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Combined bottom-up and top-down mass spectrometry analyses of the pattern of post-translational modifications of Drosophila melanogaster linker histone H1.

6 July 2018

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Histone h1 depletion impairs embryonic stem cell differentiation

6 July 2018

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Topological domains in mammalian genomes identified by analysis of chromatin interactions

6 July 2018

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A dual role of linker histone H1.4 Lys 34 acetylation in transcriptional activation

6 July 2018

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Drosophila melanogaster linker histone dH1 is required for transposon silencing and to preserve genome integrity

6 July 2018

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The nuclear envelope environment and its cancer connections

6 July 2018

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N- and C-terminal domains determine differential nucleosomal binding geometry and affinity of linker histone isotypes H1(0) and H1c.

6 July 2018

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Functional interplay between p53 acetylation and H1.2 phosphorylation in p53-regulated transcription

6 July 2018

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Histone H1 expression in human prostate cancer tissues and cell lines.

6 July 2018

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Profiling of linker histone variants in ovarian cancer

6 July 2018

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Global DNA hypomethylation coupled to repressive chromatin domain formation and gene silencing in breast cancer

6 July 2018

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Histone H1 variants are differentially expressed and incorporated into chromatin during differentiation and reprogramming to pluripotency

6 July 2018

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Genome-scale epigenetic reprogramming during epithelial-to-mesenchymal transition

6 July 2018

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Four enzymes cooperate to displace histone H1 during the first minute of hormonal gene activation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Mapping and analysis of chromatin state dynamics in nine human cell types

6 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Structure of the H1 C-terminal domain and function in chromatin condensation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Stepwise histone replacement by SWR1 requires dual activation with histone H2A.Z and canonical nucleosome

6 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Systematic protein location mapping reveals five principal chromatin types in Drosophila cells

6 July 2018

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PARP-1 regulates chromatin structure and transcription through a KDM5B-dependent pathway

6 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

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6 July 2018

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Histone H1 variant-specific lysine methylation by G9a/KMT1C and Glp1/KMT1D.

6 July 2018

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Distinct factors control histone variant H3.3 localization at specific genomic regions

6 July 2018

1 reference

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Genome-wide analysis of aberrant methylation in human breast cancer cells using methyl-DNA immunoprecipitation combined with high-throughput sequencing

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Histone H1 null vertebrate cells exhibit altered nucleosome architecture

6 July 2018

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BEDTools: a flexible suite of utilities for comparing genomic features

6 July 2018

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A novel mechanism of epigenetic regulation: nucleosome-space occupancy

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Histone H1 binding is inhibited by histone variant H3.3.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Histone H1 subtypes differentially modulate chromatin condensation without preventing ATP-dependent remodeling by SWI/SNF or NURF.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

CEAS: cis-regulatory element annotation system

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

H3.3/H2A.Z double variant-containing nucleosomes mark 'nucleosome-free regions' of active promoters and other regulatory regions

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

A clustering approach for identification of enriched domains from histone modification ChIP-Seq data

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

SOAP2: an improved ultrafast tool for short read alignment

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Post-translational modifications of the linker histone variants and their association with cell mechanisms.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

CHD8 suppresses p53-mediated apoptosis through histone H1 recruitment during early embryogenesis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Dynamic Histone H1 Isotype 4 Methylation and Demethylation by Histone Lysine Methyltransferase G9a/KMT1C and the Jumonji Domain-containing JMJD2/KDM4 Proteins

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Histone H1 and its isoforms: contribution to chromatin structure and function

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Depletion of human histone H1 variants uncovers specific roles in gene expression and cell growth

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Domain organization of human chromosomes revealed by mapping of nuclear lamina interactions

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Global gene expression analysis reveals specific and redundant roles for H1 variants, H1c and H1(0), in gene expression regulation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Dynamic regulation of nucleosome positioning in the human genome

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Reciprocal binding of PARP-1 and histone H1 at promoters specifies transcriptional outcomes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Isolation and characterization of a novel H1.2 complex that acts as a repressor of p53-mediated transcription.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Nepsilon-formylation of lysine is a widespread post-translational modification of nuclear proteins occurring at residues involved in regulation of chromatin function

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

High-resolution profiling of histone methylations in the human genome

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Differential affinity of mammalian histone H1 somatic subtypes for DNA and chromatin.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

The consensus coding sequences of human breast and colorectal cancers

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Phosphorylation of the linker histone H1 by CDK regulates its binding to HP1alpha

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Hyperdynamic plasticity of chromatin proteins in pluripotent embryonic stem cells.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Histone H1 depletion in mammals alters global chromatin structure but causes specific changes in gene regulation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

HP1 binds specifically to Lys26-methylated histone H1.4, whereas simultaneous Ser27 phosphorylation blocks HP1 binding

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

H1 family histones in the nucleus. Control of binding and localization by the C-terminal domain

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

The dynamics of histone H1 function in chromatin

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Characterization of phosphorylation sites on histone H1 isoforms by tandem mass spectrometry

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Human SirT1 interacts with histone H1 and promotes formation of facultative heterochromatin

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

MSX1 cooperates with histone H1b for inhibition of transcription and myogenesis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Java Treeview--extensible visualization of microarray data

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Different EZH2-containing complexes target methylation of histone H1 or nucleosomal histone H3

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Histone H1 and the dynamic regulation of chromatin function

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Mammalian linker-histone subtypes differentially affect gene expression in vivo

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Individual somatic H1 subtypes are dispensable for mouse development even in mice lacking the H1(0) replacement subtype

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Influence of linker histone H1 on chromatin remodeling

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

A compendium of the histone H1 family of somatic subtypes: an elusive cast of characters and their characteristics

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Dynamic binding of histone H1 to chromatin in living cells

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Rapid exchange of histone H1.1 on chromatin in living human cells

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

The distribution of somatic H1 subtypes is non-random on active vs. inactive chromatin: distribution in human fetal fibroblasts

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Mapping DNA target sites of chromatin proteins in vivo by formaldehyde crosslinking

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Histone H1 variants play individual roles in transcription regulation in the DT40 chicken B cell line

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Nucleosomes, linker DNA, and linker histone form a unique structural motif that directs the higher-order folding and compaction of chromatin

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Role of histone H1 as an architectural determinant of chromatin structure and as a specific repressor of transcription on Xenopus oocyte 5S rRNA genes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Varied expression patterns of human H1 histone genes in different cell lines

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

The mouse histone H1 genes: gene organization and differential regulation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Linker histone H1 regulates specific gene expression but not global transcription in vivo

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Alteration in proportions of histone H1 variants during the differentiation of murine erythroleukaemic cells

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Involvement of histone H1 in the organization of the nucleosome and of the salt-dependent superstructures of chromatin

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

The N-terminal domain determines the affinity and specificity of H1 binding to chromatin

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

FoxP3 interacts with linker histone H1.5 to modulate gene expression and program Treg cell activity

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Isoform-specific phosphorylation of human linker histone H1.4 in mitosis by the kinase Aurora B.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Linker histone H1 is present in centromeric chromatin of living human cells next to inner kinetochore proteins

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Monoubiquitinated histone H1B is required for antiviral protection in CD4(+)T cells resistant to HIV-1.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Reductions in linker histone levels are tolerated in developing spermatocytes but cause changes in specific gene expression.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Involvement of histone H1.2 in apoptosis induced by DNA double-strand breaks

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Distribution of somatic H1 subtypes is non-random on active vs. inactive chromatin II: distribution in human adult fibroblasts.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

DNA-induced alpha-helical structure in the NH2-terminal domain of histone H1.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

Changes in the protein pattern of H1 histones associated with apoptotic DNA fragmentation

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

DNA Methylation and Cancer

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3985652

The transcriptional regulation of Xenopus 5s RNA genes in chromatin: the roles of active stable transcription complexes and histone H1

27 October 2018

1 reference

12 December 2020

The histone H1 complements of dividing and nondividing cells of the mouse

1 reference

12 December 2020

Decreased expression of specific genes in yeast cells lacking histone H1

1 reference

12 December 2020

Changes in H1 complement in differentiating rat-brain cortical neurons

1 reference

12 December 2020

Promyelocytic leukemia zinc finger and histone H1.5 differentially stain low- and high-grade pulmonary neuroendocrine tumors: a pilot immunohistochemical study

1 reference

12 December 2020

H2A.Z and H3.3 histone variants affect nucleosome structure: biochemical and biophysical studies

1 reference

12 December 2020

Mass spectrometric mapping of linker histone H1 variants reveals multiple acetylations, methylations, and phosphorylation as well as differences between cell culture and tissue

1 reference

12 December 2020

Changes in the proportions of histone H1° subtypes in brain cortical neurons

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/GKU079

1 reference

1 August 2017

1 reference

1 August 2017

1 reference