A panel of ancestry informative markers for the complex five-way admixed South African coloured population (Q34394828)

1 August 2017

A panel of ancestry informative markers for the complex five-way admixed South African coloured population (English)

1 reference

1 August 2017

0 references

Muneeb Salie

5

0 references

Marlo Möller

Marlo Möller

4

0 references

Eileen Hoal

Eileen Hoal

11

0 references

Lize van der Merwe

Lize van der Merwe

2

0 references

Paul van Helden

8

Paul D van Helden

1 reference

1 August 2017

Michelle Daya

1

1 reference

1 August 2017

Ushma Galal

3

1 reference

1 August 2017

Emile R Chimusa

6

1 reference

1 August 2017

Joshua M Galanter

7

1 reference

1 August 2017

Brenna M Henn

9

1 reference

1 August 2017

Chris R Gignoux

10

1 reference

1 August 2017

language of work or name

English

0 references

publication date

20 December 2013

1 reference

1 August 2017

1 reference

1 August 2017

8

1 reference

1 August 2017

12

1 reference

1 August 2017

e82224

1 reference

Creative Commons Attribution 4.0 International

1 August 2017

start time

20 December 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Determining ancestry proportions in complex admixture scenarios in South Africa using a novel proxy ancestry selection method

1 reference

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Genome-wide association study of ancestry-specific TB risk in the South African Coloured population

6 July 2018

1 reference

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Genomic variation in seven Khoe-San groups reveals adaptation and complex African history

6 July 2018

1 reference

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Development of a Panel of Genome-Wide Ancestry Informative Markers to Study Admixture Throughout the Americas

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3869660

Genome-wide association study of type 2 diabetes in a sample from Mexico City and a meta-analysis of a Mexican-American sample from Starr County, Texas

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3869660

Hunter-gatherer genomic diversity suggests a southern African origin for modern humans

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3869660

Polymorphisms in MC3R promoter and CTSZ 3'UTR are associated with tuberculosis susceptibility

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3869660

A comparison of association methods correcting for population stratification in case-control studies

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3869660

Gene-gene interaction between tuberculosis candidate genes in a South African population

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3869660

Analysis of eight genes modulating interferon gamma and human genetic susceptibility to tuberculosis: a case-control association study

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3869660

Genome-wide analysis of the structure of the South African Coloured Population in the Western Cape

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3869660

Strong maternal Khoisan contribution to the South African coloured population: a case of gender-biased admixture

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3869660

Current findings, challenges and novel approaches in human genetic susceptibility to tuberculosis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3869660

Complete Khoisan and Bantu genomes from southern Africa

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3869660

Genome-wide patterns of population structure and admixture in West Africans and African Americans

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3869660

A functional haplotype in the 3'untranslated region of TNFRSF1B is associated with tuberculosis in two African populations

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3869660

Fast model-based estimation of ancestry in unrelated individuals

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3869660

An ancestry informative marker set for determining continental origin: validation and extension using human genome diversity panels

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3869660

The genetic structure and history of Africans and African Americans

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3869660

Ancestry informative marker sets for determining continental origin and admixture proportions in common populations in America

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3869660

A panel of ancestry informative markers for estimating individual biogeographical ancestry and admixture from four continents: utility and applications

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3869660

6 July 2018

1 reference

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PLINK: a tool set for whole-genome association and population-based linkage analyses

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3869660

Principal components analysis corrects for stratification in genome-wide association studies

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3869660

Proportioning whole-genome single-nucleotide-polymorphism diversity for the identification of geographic population structure and genetic ancestry

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3869660

CYP3A5 genotypes and risk of oesophageal cancer in two South African populations

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3869660

Genetic structure, self-identified race/ethnicity, and confounding in case-control association studies

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3869660

The effects of human population structure on large genetic association studies

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3869660

Informativeness of genetic markers for inference of ancestry.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3869660

Human population genetic structure and inference of group membership

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3869660

An apportionment of human DNA diversity

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3869660

Genetic dissection of complex traits

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3869660

Origins and affinities of modern humans: a comparison of mitochondrial and nuclear genetic data

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3869660

The Apportionment of Human Diversity

6 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0082224

The genomic distribution of population substructure in four populations using 8,525 autosomal SNPs.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0082224

Algorithms for selecting informative marker panels for population assignment.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0082224

Genetic structure of a unique admixed population: implications for medical research

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0082224

Mexican American ancestry-informative markers: examination of population structure and marker characteristics in European Americans, Mexican Americans, Amerindians and Asians

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0082224

Inferring ancestral origin using a single multiplex assay of ancestry-informative marker SNPs.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0082224

A new mutation, R563Q, of the beta subunit of the epithelial sodium channel associated with low-renin, low-aldosterone hypertension

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0082224

Analysis of the three common mutations in the CARD15 gene (R702W, G908R and 1007fs) in South African colored patients with inflammatory bowel disease.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0082224

COX-2 promoter polymorphisms and the association with prostate cancer risk in South African men.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0082224

Investigation of chromosome 17 candidate genes in susceptibility to TB in a South African population

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0082224

Alcohol dehydrogenase-2*2 allele is associated with decreased prevalence of fetal alcohol syndrome in the mixed-ancestry population of the Western Cape Province, South Africa

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3869660

Length Variation of DC-SIGN and L-SIGN Neck-Region has no Impact on Tuberculosis Susceptibility

27 October 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0082224

Population stratification in epidemiologic studies of common genetic variants and cancer: quantification of bias

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24376522

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Assessing statistical power of SNPs for population structure and conservation studies

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24376522

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0082224

1 reference

1 August 2017

0 references

1 reference

1 August 2017

1 reference