Three decades of farmed escapees in the wild: a spatio-temporal analysis of Atlantic salmon population genetic structure throughout Norway (Q34391334)

1 August 2017

Three decades of farmed escapees in the wild: a spatio-temporal analysis of Atlantic salmon population genetic structure throughout Norway (English)

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1 August 2017

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Kevin A Glover

1

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1 August 2017

María Quintela

2

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1 August 2017

Vidar Wennevik

3

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1 August 2017

François Besnier

4

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1 August 2017

Anne G E Sørvik

5

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1 August 2017

Øystein Skaala

6

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1 August 2017

language of work or name

English

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publication date

15 August 2012

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1 August 2017

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1 August 2017

7

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1 August 2017

8

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1 August 2017

e43129

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Creative Commons Attribution 4.0 International

1 August 2017

start time

15 August 2012

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

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Fitness of hatchery-reared salmonids in the wild

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Estimating contemporary effective population size on the basis of linkage disequilibrium in the face of migration

6 July 2018

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Use of differential expression data for identification of novel immune relevant expressed sequence tag-linked microsatellite markers in Atlantic salmon (Salmo salar L.).

6 July 2018

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Spatial analysis method (sam): a software tool combining molecular and environmental data to identify candidate loci for selection

6 July 2018

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ldne: a program for estimating effective population size from data on linkage disequilibrium

6 July 2018

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Inferring weak population structure with the assistance of sample group information

6 July 2018

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Genotyping errors in a calibrated DNA register: implications for identification of individuals

6 July 2018

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Extent and scale of local adaptation in salmonid fishes: review and meta-analysis

6 July 2018

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Temporal change in genetic integrity suggests loss of local adaptation in a wild Atlantic salmon (Salmo salar) population following introgression by farmed escapees

6 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

Comparative genomic analysis of Atlantic salmon, Salmo salar, from Europe and North America

6 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

Genetic stock identification of Atlantic salmon (Salmo salar) populations in the southern part of the European range

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

A comparison of SNP and STR loci for delineating population structure and performing individual genetic assignment.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

Sixty years of anthropogenic pressure: a spatio-temporal genetic analysis of brown trout populations subject to stocking and population declines.

6 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

A new method for estimating effective population sizes from a single sample of multilocus genotypes

6 July 2018

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Arlequin (version 3.0): an integrated software package for population genetics data analysis

6 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

Demographics and landscape features determine intrariver population structure in Atlantic salmon (Salmo salar L.): the case of the River Moy in Ireland.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

A genome-scan method to identify selected loci appropriate for both dominant and codominant markers: a Bayesian perspective

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

LOSITAN: a workbench to detect molecular adaptation based on a Fst-outlier method

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

Unbiased estimator for genetic drift and effective population size.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

CLUMPP: a cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

A critical review of adaptive genetic variation in Atlantic salmon: implications for conservation.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

Population fragmentation leads to spatial and temporal genetic structure in the endangered Spanish imperial eagle.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

Genetic monitoring as a promising tool for conservation and management.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

Genotyping errors: causes, consequences and solutions

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

Spatio-temporal variation in the genetic composition of wild populations of pearl oyster (Pinctada margaritifera cumingii) in French Polynesia following 10 years of juvenile translocation.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

Fitness reduction and potential extinction of wild populations of Atlantic salmon, Salmo salar, as a result of interactions with escaped farm salmon.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

Estimating effective population size and migration rates from genetic samples over space and time.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

The major histocompatibility class I locus in Atlantic salmon (Salmo salar L.): polymorphism, linkage analysis and protein modelling.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

Inference of population structure using multilocus genotype data

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

New methods employing multilocus genotypes to select or exclude populations as origins of individuals

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

Detecting immigration by using multilocus genotypes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

On the potential for estimating the effective number of breeders from heterozygote-excess in progeny.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

Atlantic salmon, Salmo salar, microsatellites at the SSOSL25, SSOSL85, SSOSL311, SSOSL417 loci

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

Allele frequency covariance among cohorts and its use in estimating effective size of age-structured populations.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

Determinants of hierarchical genetic structure in Atlantic salmon populations: environmental factors vs. anthropogenic influences.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

COMPUTER PROGRAMS: onesamp: a program to estimate effective population size using approximate Bayesian computation

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

Generic genetic differences between farmed and wild Atlantic salmon identified from a 7K SNP-chip.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

Testing temporal changes in allele frequencies: a simulation approach.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

Landscape genetics and hierarchical genetic structure in Atlantic salmon: the interaction of gene flow and local adaptation.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

Life-history and habitat features influence the within-river genetic structure of Atlantic salmon.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

Microsatellite genotyping errors: detection approaches, common sources and consequences for paternal exclusion

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

Identifying adaptive genetic divergence among populations from genome scans.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

Unique haplotypes of co-segregating major histocompatibility class II A and class II B alleles in Atlantic salmon (Salmo salar) give rise to diverse class II genotypes.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

Population structure of Atlantic salmon (Salmo salar L.): a range-wide perspective from microsatellite DNA variation

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

Lifetime success and interactions of farm salmon invading a native population.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3419752

THE BOTTLENECK EFFECT AND GENETIC VARIABILITY IN POPULATIONS

27 October 2018

1 reference

12 December 2020

Loss of genetic integrity correlates with stocking intensity in brook charr (Salvelinus fontinalis)

1 reference

12 December 2020

Protein and microsatellite single locus variability in Salmo salar L. (Atlantic salmon)

1 reference

12 December 2020

Temporal Variation in Allele Frequencies: Testing the Right Hypothesis

1 reference

12 December 2020

The effect of habitat fragmentation on the genetic structure of a top predator: loss of diversity and high differentiation among remnant populations of Atlantic Forest jaguars (Panthera onca)

1 reference

12 December 2020

Rapid parallel evolutionary changes of gene transcription profiles in farmed Atlantic salmon

1 reference

12 December 2020

10.1371/JOURNAL.PONE.0043129

Identifiers

DOI

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1 August 2017

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1 August 2017

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