Prediction of consensus structural motifs in a family of coregulated RNA sequences (Q34376136)

1 August 2017

Prediction of consensus structural motifs in a family of coregulated RNA sequences (English)

1 reference

1 August 2017

Yuh-Jyh Hu

1

1 reference

PubMed ID

12202774

1 August 2017

language of work or name

English

0 references

publication date

1 September 2002

1 reference

1 August 2017

Nucleic Acids Research

1 reference

1 August 2017

30

1 reference

1 August 2017

17

1 reference

1 August 2017

3886-3893

1 reference

Discovering common stem-loop motifs in unaligned RNA sequences

1 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137409

PseudoBase: structural information on RNA pseudoknots

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137409

Prediction of common secondary structures of RNAs: a genetic algorithm approach

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137409

UTRdb and UTRsite: specialized databases of sequences and functional elements of 5' and 3' untranslated regions of eukaryotic mRNAs

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137409

The European small subunit ribosomal RNA database

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137409

Correlation between protein and mRNA abundance in yeast

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137409

A dynamic programming algorithm for RNA structure prediction including pseudoknots

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137409

Extracting regulatory sites from the upstream region of yeast genes by computational analysis of oligonucleotide frequencies.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137409

Finding the most significant common sequence and structure motifs in a set of RNA sequences

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137409

RNA structure and the regulation of gene expression

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137409

Detecting subtle sequence signals: a Gibbs sampling strategy for multiple alignment

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137409

Lessons from an evolving rRNA: 16S and 23S rRNA structures from a comparative perspective.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137409

RNA sequence analysis using covariance models

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137409

An APL-programmed genetic algorithm for the prediction of RNA secondary structure

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137409

Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137409

Identification of consensus patterns in unaligned DNA sequences known to be functionally related.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137409

Comparison of the predicted and observed secondary structure of T4 phage lysozyme

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137409

Phylogenetically enhanced statistical tools for RNA structure prediction.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137409

Combinatorial motif analysis and hypothesis generation on a genomic scale

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137409

The computer simulation of RNA folding pathways using a genetic algorithm.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137409

An RNA pattern matching program with enhanced performance and portability.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137409

Regulation of protein synthesis by mRNA structure

27 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12202774

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKF485

1 reference

release_ivhygh6z4vajbo3mf6h2ut35ay

1 August 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/ivhygh6z4vajbo3mf6h2ut35ay

mapped directly with Wikidata item

24 November 2022

based on heuristic

PMCID

137409

1 reference

1 August 2017

1 reference

PubMed ID

12202774