Simultaneously reconstructing viral cross-species transmission history and identifying the underlying constraints (Q34326265)

1 August 2017

Simultaneously reconstructing viral cross-species transmission history and identifying the underlying constraints (English)

1 reference

1 August 2017

3

Andrew Rambaut

0 references

Philippe Lemey

series ordinal

5

object named as

Philippe Lemey

0 references

Nuno Rodrigues Faria

object named as

Nuno Rodrigues Faria

series ordinal

1

0 references

Marc A. Suchard

series ordinal

2

object named as

Marc A Suchard

1 reference

1 August 2017

4

Daniel G Streicker

1 reference

PubMed ID

23382420

1 August 2017

language of work or name

English

0 references

publication date

4 February 2013

1 reference

Philosophical Transactions of the Royal Society B

1 August 2017

1 reference

1 August 2017

368

1 reference

1 August 2017

20120196

1 reference

1 August 2017

1614

1 reference

Molecular dating of human-to-bovid host jumps by Staphylococcus aureus reveals an association with the spread of domestication

1 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3678322

Rates of viral evolution are linked to host geography in bat rabies

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3678322

Toward a quantitative understanding of viral phylogeography

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3678322

Bayesian phylogenetics with BEAUti and the BEAST 1.7

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3678322

Host phylogeny determines viral persistence and replication in novel hosts

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3678322

BEAGLE: an application programming interface and high-performance computing library for statistical phylogenetics

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3678322

Rabies surveillance in the United States during 2010.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3678322

Ancient hybridization and an Irish origin for the modern polar bear matriline

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3678322

Impact of CCR5delta32 host genetic background and disease progression on HIV-1 intrahost evolutionary processes: efficient hypothesis testing through hierarchical phylogenetic models

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3678322

Phylodynamics and human-mediated dispersal of a zoonotic virus

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3678322

A Bayesian phylogenetic method to estimate unknown sequence ages

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3678322

Bayesian random local clocks, or one rate to rule them all

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3678322

Host phylogeny constrains cross-species emergence and establishment of rabies virus in bats

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3678322

Unified framework to evaluate panmixia and migration direction among multiple sampling locations

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3678322

Epidemic dynamics at the human-animal interface.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3678322

Bayesian phylogeography finds its roots

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3678322

Many-core algorithms for statistical phylogenetics

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3678322

Transmission dynamics and prospects for the elimination of canine rabies

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3678322

Learning to count: robust estimates for labeled distances between molecular sequences

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3678322

Emerging infections: a perpetual challenge

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3678322

Cross-Species Virus Transmission and the Emergence of New Epidemic Diseases

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3678322

Smooth skyride through a rough skyline: Bayesian coalescent-based inference of population dynamics

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3678322

Global trends in emerging infectious diseases

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3678322

Ecological origins of novel human pathogens.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3678322

Origins of major human infectious diseases

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3678322

A high-resolution genetic signature of demographic and spatial expansion in epizootic rabies virus

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3678322

Phylogenetic signal in plant pathogen-host range

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3678322

Bats: important reservoir hosts of emerging viruses

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3678322

Relaxed phylogenetics and dating with confidence

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3678322

Venezuelan encephalitis emergence mediated by a phylogenetically predicted viral mutation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3678322

Unifying the spatial population dynamics and molecular evolution of epidemic rabies virus

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3678322

Predictive spatial dynamics and strategic planning for raccoon rabies emergence in Ohio

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3678322

Probable person-to-person transmission of avian influenza A (H5N1)

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3678322

Molecular Clocks and the Puzzle of RNA Virus Origins

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3678322

Predicting the spatial dynamics of rabies epidemics on heterogeneous landscapes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3678322

Risk factors for human disease emergence

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3678322

Evolutionary timescale of rabies virus adaptation to North American bats inferred from the substitution rate of the nucleoprotein gene

6 July 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2012.0196

Experimental rabies virus infection of big brown bats (Eptesicus fuscus).

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2012.0196

Counting labeled transitions in continuous-time Markov models of evolution.

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2012.0196

The role of swine as "mixing vessel" for interspecies transmission of the influenza A subtype H1N1: a simultaneous Bayesian inference of phylogeny and ancestral hosts.

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2012.0196

Ecology and evolution of rabies virus in Europe

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2012.0196

Emerging pathogens: the epidemiology and evolution of species jumps

21 January 2018

1 reference

https://api.crossref.org/works/10.1098%2FRSTB.2012.0196

21 January 2018

Identifiers

DOI

10.1098/RSTB.2012.0196

1 reference

1 August 2017

1 reference

1 August 2017

1 reference

PubMed ID

23382420