Selection-driven gene loss in bacteria (Q34325560)

1 August 2017

Selection-driven gene loss in bacteria (English)

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1 August 2017

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1 reference

Sanna Koskiniemi

1

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1 August 2017

Song Sun

series ordinal

2

1 reference

1 August 2017

Otto G Berg

series ordinal

3

1 reference

1 August 2017

Dan I Andersson

series ordinal

4

1 reference

1 August 2017

28 June 2012

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1 August 2017

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1 August 2017

8

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1 August 2017

6

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1 August 2017

e1002787

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Creative Commons Attribution 4.0 International

1 August 2017

start time

28 June 2012

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

The distribution of the numbers of mutants in bacterial populations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386194

Extreme genome reduction in symbiotic bacteria

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386194

Phylogenetics of cytoplasmically inherited microorganisms of arthropods

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386194

Genome evolution and adaptation in a long-term experiment with Escherichia coli

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386194

The consequences of genetic drift for bacterial genome complexity

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386194

Genomics and evolution of heritable bacterial symbionts

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386194

The small genome of an abundant coastal ocean methylotroph

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386194

Learning how to live together: genomic insights into prokaryote-animal symbioses

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386194

The origins of modern proteomes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386194

Mutations of Bacteria from Virus Sensitivity to Virus Resistance

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386194

Black holes, antivirulence genes, and gene inactivation in the evolution of bacterial pathogens

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386194

Genome rearrangements, deletions, and amplifications in the natural population of Bartonella henselae

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386194

Analysis of the Salmonella typhimurium proteome through environmental response toward infectious conditions

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386194

Genome Streamlining in a Cosmopolitan Oceanic Bacterium

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386194

Bacterial genome size reduction by experimental evolution

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386194

Accelerated evolution associated with genome reduction in a free-living prokaryote

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386194

Genomic changes following host restriction in bacteria

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386194

Evolution of minimal-gene-sets in host-dependent bacteria.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386194

Tracing the evolution of gene loss in obligate bacterial symbionts

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386194

Microbial minimalism: genome reduction in bacterial pathogens

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386194

The process of genome shrinkage in the obligate symbiont Buchnera aphidicola

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386194

Pathoadaptive mutations that enhance virulence: genetic organization of the cadA regions of Shigella spp.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386194

Deletional bias and the evolution of bacterial genomes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386194

Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386194

One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386194

Evidence for genetic drift in endosymbionts (Buchnera): analyses of protein-coding genes.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386194

"Black holes" and bacterial pathogenicity: a large genomic deletion that enhances the virulence of Shigella spp. and enteroinvasive Escherichia coli

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386194

Accelerated evolution and Muller's rachet in endosymbiotic bacteria

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386194

Molecular genetic analysis of the moa operon of Escherichia coli K-12 required for molybdenum cofactor biosynthesis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386194

Hyperrecombination in the terminus region of the Escherichia coli chromosome: possible relation to nucleoid organization.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386194

The protein burden of lac operon products

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386194

Homologous recombination in Escherichia coli: dependence on substrate length and homology

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386194

Ionic inhibition of formation of RecA nucleoprotein networks blocks homologous pairing

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386194

Mutations in the bglY gene increase the frequency of spontaneous deletions in Escherichia coli K-12

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386194

Analysis and possible role of hyperrecombination in the termination region of the Escherichia coli chromosome

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3386194

Negative epistasis between beneficial mutations in an evolving bacterial population

6 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1002787

Reductive evolution of resident genomes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1002787

Genome size reduction through multiple events of gene disintegration in Buchnera APS.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1002787

Lifestyle evolution in symbiotic bacteria: insights from genomics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1002787

Loss of DNA recombinational repair enzymes in the initial stages of genome degeneration

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1002787

Compensatory gene amplification restores fitness after inter-species gene replacements.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1002787

The influence of cell size on marine bacterial motility and energetics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1002787

SELECTION FOR TRYPTOPHAN AUXOTROPHS OF ESCHERICHIA COLI IN GLUCOSE-LIMITED CHEMOSTATS AS A TEST OF THE ENERGY CONSERVATION HYPOTHESIS OF EVOLUTION

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22761588

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Study of microbial evolution through loss of biosynthetic functions: establishment of "defective" mutants

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22761588

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Costs of accuracy determined by a maximal growth rate constraint

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22761588

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PGEN.1002787

1 reference

1 August 2017

1 reference

1 August 2017

1 reference