A classification model for G-to-A hypermutation in hepatitis B virus ultra-deep pyrosequencing reads (Q34313685)

1 August 2017

A classification model for G-to-A hypermutation in hepatitis B virus ultra-deep pyrosequencing reads (English)

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1 August 2017

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Elizabeth C Reuman

1

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1 August 2017

Severine Margeridon-Thermet

2

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1 August 2017

Harrison B Caudill

3

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1 August 2017

Tommy Liu

4

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1 August 2017

Katyna Borroto-Esoda

5

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1 August 2017

Evguenia S Svarovskaia

6

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1 August 2017

Susan P Holmes

7

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1 August 2017

Robert W Shafer

8

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1 August 2017

language of work or name

English

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publication date

11 October 2010

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1 August 2017

4

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based on heuristic

inferred from page(s)

published in

Bioinformatics

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1 August 2017

26

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1 August 2017

23

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1 August 2017

2929-2932

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describes a project that uses

1 August 2017

Bayes' theorem

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18 June 2022

https://europepmc.org/article/PMC/2982158

based on heuristic

inferred from PubMed Central ID database lookup

cites work

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1 reference

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Nucleic acid template and the risk of a PCR-Induced HIV-1 drug resistance mutation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2982158

Ultra-deep pyrosequencing of hepatitis B virus quasispecies from nucleoside and nucleotide reverse-transcriptase inhibitor (NRTI)-treated patients and NRTI-naive patients.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2982158

Genetic editing of HBV DNA by monodomain human APOBEC3 cytidine deaminases and the recombinant nature of APOBEC3G.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2982158

Use of massively parallel ultradeep pyrosequencing to characterize the genetic diversity of hepatitis B virus in drug-resistant and drug-naive patients and to detect minor variants in reverse transcriptase and hepatitis B S antigen

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2982158

Hypermutation of hepatitis B virus genomes by APOBEC3G, APOBEC3C and APOBEC3H.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2982158

Sequence editing by Apolipoprotein B RNA-editing catalytic component [corrected] and epidemiological surveillance of transmitted HIV-1 drug resistance

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2982158

Major causes of antiviral drug resistance and implications for treatment of hepatitis B virus monoinfection and coinfection with HIV.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2982158

Characterization of mutation spectra with ultra-deep pyrosequencing: application to HIV-1 drug resistance

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2982158

Antiviral drug-resistant HBV: standardization of nomenclature and assays and recommendations for management

6 July 2018

1 reference

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Role and mechanism of action of the APOBEC3 family of antiretroviral resistance factors

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2982158

Extensive editing of both hepatitis B virus DNA strands by APOBEC3 cytidine deaminases in vitro and in vivo

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2982158

G to A hypermutation of hepatitis B virus.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2982158

A web-based genotyping resource for viral sequences

6 July 2018

1 reference

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Isolation of a human gene that inhibits HIV-1 infection and is suppressed by the viral Vif protein

6 July 2018

1 reference

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HyperPack: a software package for the study of levels, contexts, and patterns of APOBEC-mediated hypermutation in HIV.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2982158

A revised evolutionary history of hepatitis B virus (HBV).

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2982158

Hepatitis B virus genomes from long-term immunosuppressed virus carriers are modified by specific mutations in several regions

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2982158

Detecting hypermutations in viral sequences with an emphasis on G --> A hypermutation

28 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20937597

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/BIOINFORMATICS/BTQ570

1 reference

journals/bioinformatics/ReumanMCLBSHS10

1 August 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

1 August 2017

1 reference