A multigene phylogenetic synthesis for the class Lecanoromycetes (Ascomycota): 1307 fungi representing 1139 infrageneric taxa, 317 genera and 66 families (Q34289420)

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English	A multigene phylogenetic synthesis for the class Lecanoromycetes (Ascomycota): 1307 fungi representing 1139 infrageneric taxa, 317 genera and 66 families	scientific article

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scholarly article

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Europe PubMed Central

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A multigene phylogenetic synthesis for the class Lecanoromycetes (Ascomycota): 1307 fungi representing 1139 infrageneric taxa, 317 genera and 66 families (English)

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Europe PubMed Central

1 August 2017

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Leena Myllys

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Soili Kristina Stenroos

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Soili Stenroos

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Cécile Gueidan

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Cécile Gueidan

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Emmanuël Sérusiaux

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Emmanuël Sérusiaux

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François Lutzoni

31

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François Lutzoni

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Jolanta Miądlikowska

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Jolanta Miadlikowska

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Robert Lücking

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Robert Lücking

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Martin Kukwa

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Helge Thorsten Lumbsch

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H Thorsten Lumbsch

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Arne Thell

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Harrie J M Sipman

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Samantha Fernández-Brime

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Samantha Fernández-Brime

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Valérie Hofstetter

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Valérie Hofstetter

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Conrad Lamoraal Schoch

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Conrad L Schoch

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Frank Kauff

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Emily Fraker

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Brendan Paul Hodkinson

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Brendan Hodkinson

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Geir Hestmark

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James Colin Lendemer

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James Lendemer

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Trevor Goward

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author name string

Filip Högnabba

3

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Jeffrey C Oliver

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Katalin Molnár

5

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1 August 2017

Ester Gaya

7

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1 August 2017

Josef Hafellner

8

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Mónica A G Otálora

11

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Curtis Björk

15

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Ana Rosa Burgaz

17

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Alfredo Passo

19

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Michaela Schmull

26

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David R Maddison

29

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A Elizabeth Arnold

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publication date

18 April 2014

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number of pages

37

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Molecular Phylogenetics and Evolution

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79

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132-168

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Molecular phylogeny and symbiotic selectivity of the green algal genus Dictyochloropsis s.l. (Trebouxiophyceae): a polyphyletic and widespread group forming photobiont-mediated guilds in the lichen family Lobariaceae.

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A radical shift in the taxonomy of Lepraria s.l.: molecular and morphological studies shed new light on the evolution of asexuality and lichen growth form diversification.

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Cardinal characters on a slippery slope--a re-evaluation of phylogeny, character evolution, and evolutionary rates in the jelly lichens (Collemataceae s. str).

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High-throughput genome sequencing of lichenizing fungi to assess gene loss in the ammonium transporter/ammonia permease gene family

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6 July 2018

Phylogenetic classification at generic level in the absence of distinct phylogenetic patterns of phenotypical variation: a case study in graphidaceae (ascomycota)

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The relationships of Odontotrema (Odontotremataceae) and the resurrected Sphaeropezia (Stictidaceae)--new combinations and three new Sphaeropezia species

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Diversification of the newly recognized lichen-forming fungal lineage Montanelia (Parmeliaceae, Ascomycota) and its relation to key geological and climatic events

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Culture-based study of endophytes associated with rubber trees in Peru reveals a new class of Pezizomycotina: Xylonomycetes

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Implementing a cumulative supermatrix approach for a comprehensive phylogenetic study of the Teloschistales (Pezizomycotina, Ascomycota).

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6 July 2018

Do photobionts influence the ecology of lichens? A case study of environmental preferences in symbiotic green alga Asterochloris (Trebouxiophyceae).

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6 July 2018

Phylogenetic classification of peltigeralean fungi (Peltigerales, Ascomycota) based on ribosomal RNA small and large subunits

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6 July 2018

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6 July 2018

Dolabra nepheliae on rambutan and lychee represents a novel lineage of phytopathogenic Eurotiomycetes

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6 July 2018

A phylogenetic estimation of trophic transition networks for ascomycetous fungi: are lichens cradles of symbiotrophic fungal diversification?

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6 July 2018

The Ascomycota tree of life: a phylum-wide phylogeny clarifies the origin and evolution of fundamental reproductive and ecological traits

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6 July 2018

Photobiont diversity in lichens from metal-rich substrata based on ITS rDNA sequences

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6 July 2018

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6 July 2018

Evolutionary inferences based on ITS rDNA and actin sequences reveal extensive diversity of the common lichen alga Asterochloris (Trebouxiophyceae, Chlorophyta).

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6 July 2018

Slippery when wet: phylogeny and character evolution in the gelatinous cyanobacterial lichens (Peltigerales, Ascomycetes).

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6 July 2018

The limitations of ancestral state reconstruction and the evolution of the ascus in the Lecanorales (lichenized Ascomycota).

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6 July 2018

Ascus types are phylogenetically misleading in Trapeliaceae and Agyriaceae (Ostropomycetidae, Ascomycota).

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6 July 2018

The sister group relation of parmeliaceae (Lecanorales, Ascomycota).

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New insights into classification and evolution of the Lecanoromycetes (Pezizomycotina, Ascomycota) from phylogenetic analyses of three ribosomal RNA- and two protein-coding genes

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The phylogenetic placement of Ostropales within Lecanoromycetes (Ascomycota) revisited

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Testing morphology-based hypotheses of phylogenetic relationships in Parmeliaceae (Ascomycota) using three ribosomal markers and the nuclear RPB1 gene

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6 July 2018

Phylogenetic comparison of protein-coding versus ribosomal RNA-coding sequence data: a case study of the Lecanoromycetes (Ascomycota).

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6 July 2018

Reconstructing the early evolution of Fungi using a six-gene phylogeny

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Phylogenetic significance of morphological characters in the tropical Hypotrachyna clade of parmelioid lichens (Parmeliaceae, Ascomycota).

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6 July 2018

Phylogenetic relationships of Lecanoromycetes (Ascomycota) as revealed by analyses of mtSSU and nLSU rDNA sequence data

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Disintegration of the Micareaceae (lichenized Ascomycota): a molecular phylogeny based on mitochondrial rDNA sequences

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6 July 2018

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7 January 2021

The phylogeny of Porinaceae (Ostropomycetidae) suggests a neotenic origin of perithecia in Lecanoromycetes.

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6 July 2018

Contribution of RPB2 to multilocus phylogenetic studies of the euascomycetes (Pezizomycotina, Fungi) with special emphasis on the lichen-forming Acarosporaceae and evolution of polyspory

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6 July 2018

MUSCLE: multiple sequence alignment with high accuracy and high throughput

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Integrating ambiguously aligned regions of DNA sequences in phylogenetic analyses without violating positional homology

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6 July 2018

Major fungal lineages are derived from lichen symbiotic ancestors

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SEAVIEW and PHYLO_WIN: two graphic tools for sequence alignment and molecular phylogeny

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Convergent evolution of a symbiotic duet: The case of the lichen genus Polychidium (Peltigerales, Ascomycota)

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Phylogenetic affiliations of members of the heterogeneous lichen-forming fungi of the genus Lecidea sensu Zahlbruckner (Lecanoromycetes, Ascomycota).

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28 October 2018

Parallel evolution and phenotypic divergence in lichenized fungi: a case study in the lichen-forming fungal family Graphidaceae (Ascomycota: Lecanoromycetes: Ostropales).

1 reference

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Population structure of mycobionts and photobionts of the widespread lichen Cetraria aculeata.

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28 October 2018

Single origin and subsequent diversification of central Andean endemic Umbilicaria species.

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Multiple origins of high reciprocal symbiotic specificity at an intercontinental spatial scale among gelatinous lichens (Collemataceae, Lecanoromycetes).

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28 October 2018

Disentangling the Collema-Leptogium complex through a molecular phylogenetic study of the Collemataceae (Peltigerales, lichen-forming Ascomycota).

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28 October 2018

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28 October 2018

Profiling phylogenetic informativeness

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28 October 2018

Stictis s. lat. (Ostropales, Ascomycota) in northern Scandinavia, with a key and notes on morphological variation in relation to lifestyle.

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28 October 2018

Molecular phylogeny of Acarosporaceae (Ascomycota) with focus on the proposed genus Polysporinopsis.

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28 October 2018

Polytomies and Bayesian phylogenetic inference

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28 October 2018

Resolving evolutionary relationships in the lichen-forming genus Porpidia and related allies (Porpidiaceae, Ascomycota).

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28 October 2018

Supraordinal phylogenetic relationships of Lecanoromycetes based on a Bayesian analysis of combined nuclear and mitochondrial sequences

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28 October 2018

Bayes or bootstrap? A simulation study comparing the performance of Bayesian Markov chain Monte Carlo sampling and bootstrapping in assessing phylogenetic confidence

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28 October 2018

Phylogeny of the Gyalectales and Ostropales (Ascomycota, Fungi): among and within order relationships based on nuclear ribosomal RNA small and large subunits.

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28 October 2018

A new taxonomy of the family Teloschistaceae

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7 January 2021

Molecular phylogenetics and taxonomy of Hypocenomyce sensu lato (Ascomycota: Lecanoromycetes): Extreme polyphyly and morphological/ecological convergence

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7 January 2021

Evolutionary history of vegetative reproduction in Porpidia s.L. (Lichen-forming ascomycota)

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7 January 2021

A Review of Psilolechia

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7 January 2021

Phylogenetic generic classification of parmelioid lichens (Parmeliaceae, Ascomycota) based on molecular, morphological and chemical evidence

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7 January 2021

Molecular data place the hyphomycetous lichenicolous genus Sclerococcum close to Dactylospora (Eurotiomycetes) and S. parmeliae in Cladophialophora (Chaetothyriales)

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Life history strategy of Lepraria borealis at an Antarctic inland site, Coal Nunatak

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.003

7 January 2021

Savoronala, a new genus of Malmideaceae (Lecanorales) from Madagascar with stipes producing sporodochia

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.003

7 January 2021

Phylogenetic study of Diploschistes (lichen-forming Ascomycota: Ostropales: Graphidaceae), based on morphological, chemical, and molecular data

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.003

7 January 2021

Reassessment of the genus Catillochroma (lichenized Ascomycota, Ramalinaceae)

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.003

7 January 2021

Gowardia (Parmeliaceae)—a new alectorioid lichen genus with two species

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.003

7 January 2021

Lecanora thysanophora, a Common Leprose Lichen in Eastern North America

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.003

7 January 2021

A new circumscription of the genus <I>Ramboldia</I> (Lecanoraceae, Ascomycota) based on morphological and molecular evidence

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.003

7 January 2021

Ramboldia, a New Genus in the Lichen Family Lecanoraceae

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.003

7 January 2021

Chirleja buckii, a new genus and species of lichenized-fungi from Tierra del Fuego, southern South America

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.003

7 January 2021

Myconet Volume 14. Part One. Outline of Ascomycota—2009. Part Two. Notes on Ascomycete Systematics. Nos. 4751–5113

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.003

7 January 2021

Molecular systematics supports the recognition of an additional order of Ascomycota: the Agyriales

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.003

7 January 2021

Gregorella, a new genus to accommodate Moelleropsis humida and a molecular phylogeny of Arctomiaceae

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.003

7 January 2021

A new species of Loxospora (lichenized Ascomycota: Sarrameanaceae) from Australia

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.003

7 January 2021

A Generic Redelimitation of the Ionaspis-Hymenelia Complex (Lichenized Ascomycotina)

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.003

7 January 2021

A further new species in the lichen genus Arctomia: A. borbonica from Reunion (Mascarene archipelago)

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.003

7 January 2021

Umbilicaria semitensis (lichenized fungi: Umbilicariaceae) resurrected

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.003

7 January 2021

Phylogeny of the Lobariaceae (lichenized Ascomycota: Peltigerales), with a reappraisal of the genus Lobariella

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.003

7 January 2021

Phylogenetic Relationships of Stereocaulaceae Based on Simultaneous Analysis of Beta-Tubulin, GAPDH and SSU rDNA Sequences

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.003

7 January 2021

The cetrarioid core group revisited (Lecanorales: Parmeliaceae)

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.003

7 January 2021

Collema fasciculare belongs in Arctomiaceae

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.003

7 January 2021

Taxonomy of the genusMyrionora, with a second species from South America

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.003

7 January 2021

Molecular phylogeny of the genus Lecania (Ramalinaceae, lichenized Ascomycota)

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.003

7 January 2021

Buellia tesserata and Dimelaena radiata, two closely related species

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.003

7 January 2021

A new classification for the family Graphidaceae (Ascomycota: Lecanoromycetes: Ostropales)

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.003

7 January 2021

Molecular phylogeny of the Pertusariaceae supports secondary chemistry as an important systematic character set in lichen-forming ascomycetes

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.003

7 January 2021

GyalectoidPertusariaspecies form a sister-clade toCoccotrema(Ostropomycetidae, Ascomycota) and comprise the new lichen genusGyalectaria

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.003

7 January 2021

A new circumscription of the genus Varicellaria (Pertusariales, Ascomycota)

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.003

7 January 2021

Lecania falcata, a new species from Spain, the Canary Islands and the Azores, close to Lecania chlorotiza

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.003

7 January 2021

Phylogeny and taxonomy of the ‘manna lichens’

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.003

7 January 2021

Phylogeny of the cetrarioid core ( Parmeliaceae) based on five genetic markers

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.003

7 January 2021

A review of the lichen family Parmeliaceae - history, phylogeny and current taxonomy

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.003

7 January 2021

The phylogenetic relationship of the Sphaerophoraceae, Austropeltum and Neophyllis (lichenized Ascomycota) inferred by SSU rDNA sequences

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.003

7 January 2021

Molecular Phylogeny of the Lichen Families Cladoniaceae, Sphaerophoraceae, and Stereocaulaceae (Lecanorales, Ascomycotina)

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.003

7 January 2021

Massalongiaceae fam. nov., an overlooked monophyletic group among the cyanobacterial lichens (Peltigerales, Lecanoromycetes, Ascomycota)

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.003

7 January 2021

Vahliellaceae, a new family of cyanobacterial lichens ( Peltigerales, Ascomycetes)

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.003

7 January 2021

A monograph of the genus Placomaronea (Ascomycota, Candelariales)

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.003

7 January 2021

The phylogenetic relationships of the cyanobacterial lichens in the Lecanorales suborder Peltigerineae

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.003

7 January 2021

Confidence Limits on Phylogenies: an Approach using the Bootstrap

1 reference

https://pubmed.ncbi.nlm.nih.gov/24747130

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1016/J.YMPEV.2014.04.003

1 reference

Europe PubMed Central

1 August 2017

1 reference

Europe PubMed Central

1 August 2017

1 reference

Europe PubMed Central

1 August 2017

ResearchGate publication ID

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