Alternative splicing expands the repertoire of dominant JAZ repressors of jasmonate signaling. (Q34253127)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20525008%20AND%20SRC:MED&resulttype=core&format=json

4 February 2020

title

Alternative splicing expands the repertoire of dominant JAZ repressors of jasmonate signaling (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20525008%20AND%20SRC:MED&resulttype=core&format=json

alternative mRNA splicing, via spliceosome

4 February 2020

main subject

1 reference

5

1 reference

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4 February 2020

2

Thomas F Cooke

1 reference

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4 February 2020

7

Gregg A Howe

1 reference

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4 February 2020

author name string

Hoo Sun Chung

1

1 reference

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4 February 2020

Cody L Depew

3

1 reference

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4 February 2020

Lalita C Patel

4

1 reference

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4 February 2020

Yuichi Kobayashi

6

1 reference

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4 February 2020

publication date

1 August 2010

1 reference

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4 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20525008%20AND%20SRC:MED&resulttype=core&format=json

4 February 2020

volume

63

1 reference

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4 February 2020

page(s)

613-622

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4 February 2020

issue

4

1 reference

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NINJA connects the co-repressor TOPLESS to jasmonate signalling

4 February 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

Genome sequencing and analysis of the model grass Brachypodium distachyon

6 July 2018

1 reference

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Jasmonates: structural requirements for lipid-derived signals active in plant stress responses and development

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

Genome-wide mapping of alternative splicing in Arabidopsis thaliana

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

Top hits in contemporary JAZ: an update on jasmonate signaling

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

The wound hormone jasmonate

6 July 2018

1 reference

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Identification and expression profiling analysis of TIFY family genes involved in stress and phytohormone responses in rice

6 July 2018

1 reference

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Comparative analysis indicates that alternative splicing in plants has a limited role in functional expansion of the proteome.

6 July 2018

1 reference

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(+)-7-iso-Jasmonoyl-L-isoleucine is the endogenous bioactive jasmonate

6 July 2018

1 reference

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Tandem affinity purification and mass spectrometric analysis of ubiquitylated proteins in Arabidopsis

6 July 2018

1 reference

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Ecological modulation of plant defense via phytochrome control of jasmonate sensitivity.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

Jasmonate passes muster: a receptor and targets for the defense hormone

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

Genome-wide analyses of alternative splicing in plants: opportunities and challenges.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

JAZ repressors set the rhythm in jasmonate signaling.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

Jasmonate signaling: a conserved mechanism of hormone sensing

6 July 2018

1 reference

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A critical role of two positively charged amino acids in the Jas motif of Arabidopsis JAZ proteins in mediating coronatine- and jasmonoyl isoleucine-dependent interactions with the COI1 F-box protein

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

COI1 is a critical component of a receptor for jasmonate and the bacterial virulence factor coronatine

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

JAZing up jasmonate signaling

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

Regulation and function of Arabidopsis JASMONATE ZIM-domain genes in response to wounding and herbivory.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

The Physcomitrella Genome Reveals Evolutionary Insights into the Conquest of Land by Plants

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

Plant immunity to insect herbivores

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

The JAZ family of repressors is the missing link in jasmonate signalling.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

Jasmonates: an update on biosynthesis, signal transduction and action in plant stress response, growth and development

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

The tify family previously known as ZIM.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

The nonsense-mediated decay RNA surveillance pathway

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

Alternative splicing of pre-messenger RNAs in plants in the genomic era.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

Comprehensive analysis of alternative splicing in rice and comparative analyses with Arabidopsis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

Functional diversification of acyl-coenzyme A oxidases in jasmonic acid biosynthesis and action.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray)

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

Rules for nuclear localization sequence recognition by karyopherin beta 2

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

Genomewide comparative analysis of alternative splicing in plants

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

Conserved MYC transcription factors play a key role in jasmonate signaling both in tomato and Arabidopsis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

WebLogo: A Sequence Logo Generator

6 July 2018

1 reference

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Regulation of jasmonate-mediated plant responses in arabidopsis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

Methyl jasmonate inhibition of root growth and induction of a leaf protein are decreased in an Arabidopsis thaliana mutant

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

Jasmonate-induced responses are costly but benefit plants under attack in native populations

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

COI1: an Arabidopsis gene required for jasmonate-regulated defense and fertility

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

A tomato enzyme synthesizes (+)-7-iso-jasmonoyl-L-isoleucine in wounded leaves

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

Common introns within orthologous genes: software and application to plants.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

The Arabidopsis CORONATINE INSENSITIVE1 protein is a jasmonate receptor.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

Expression of the Arabidopsis jasmonate signalling repressor JAZ1/TIFY10A is stimulated by auxin

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

A rapid wound signal activates the systemic synthesis of bioactive jasmonates in Arabidopsis.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

The ZIM domain mediates homo- and heteromeric interactions between Arabidopsis JAZ proteins

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

A critical role for the TIFY motif in repression of jasmonate signaling by a stabilized splice variant of the JASMONATE ZIM-domain protein JAZ10 in Arabidopsis

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

Wound-induced endogenous jasmonates stunt plant growth by inhibiting mitosis

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

Jasmonate-induced nicotine formation in tobacco is mediated by tobacco COI1 and JAZ genes.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

A downstream mediator in the growth repression limb of the jasmonate pathway

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

MYC2 differentially modulates diverse jasmonate-dependent functions in Arabidopsis.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

Comparative cross-species alternative splicing in plants.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

Negative regulation of defence and stress genes by EAR-motif-containing repressors

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

Intron retention is a major phenomenon in alternative splicing in Arabidopsis.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

JASMONATE-INSENSITIVE1 encodes a MYC transcription factor essential to discriminate between different jasmonate-regulated defense responses in Arabidopsis.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2966510

Context analysis of termination codons in mRNA that are recognized by plant NMD

28 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20525008

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

JAZ repressor proteins are targets of the SCFCOI1 complex during jasmonate signalling

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20525008

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1111/J.1365-313X.2010.04265.X

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20525008%20AND%20SRC:MED&resulttype=core&format=json

4 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20525008%20AND%20SRC:MED&resulttype=core&format=json

4 February 2020

1 reference