Determination of an ensemble of structures representing the intermediate state of the bacterial immunity protein Im7. (Q34248287)

31 July 2017

Determination of an ensemble of structures representing the intermediate state of the bacterial immunity protein Im7. (English)

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31 July 2017

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7

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31 July 2017

6

Emanuele Paci

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31 July 2017

8

Michele Vendruscolo

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31 July 2017

Geoffrey Robert Moore

5

object named as

Geoffrey R Moore

1 reference

31 July 2017

Joerg Gsponer

1

1 reference

31 July 2017

Harri Hopearuoho

2

1 reference

31 July 2017

Sara B-M Whittaker

3

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31 July 2017

Graham R Spence

4

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31 July 2017

language of work or name

English

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publication date

21 December 2005

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Proceedings of the National Academy of Sciences of the United States of America

31 July 2017

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31 July 2017

103

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31 July 2017

1

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31 July 2017

99-104

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All-atom empirical potential for molecular modeling and dynamics studies of proteins

31 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

A funneled energy landscape for cytochrome c directly predicts the sequential folding route inferred from hydrogen exchange experiments

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

A protein folding pathway with multiple folding intermediates at atomic resolution

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

Protein folding: the stepwise assembly of foldon units

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

Enhanced picture of protein-folding intermediates using organic solvents in H/D exchange and quench-flow experiments

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

Relationship of Leffler (Bronsted) alpha values and protein folding Phi values to position of transition-state structures on reaction coordinates

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

Trapping the on-pathway folding intermediate of Im7 at equilibrium.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

Demonstration of a low-energy on-pathway intermediate in a fast-folding protein by kinetics, protein engineering, and simulation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

Calculation of mutational free energy changes in transition states for protein folding

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

Rapid and accurate calculation of protein 1H, 13C and 15N chemical shifts

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

Hydrogen-exchange stability analysis of Bergerac-Src homology 3 variants allows the characterization of a folding intermediate in equilibrium

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

Evidence for sequential barriers and obligatory intermediates in apparent two-state protein folding

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

Determination of a transition state at atomic resolution from protein engineering data

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

Early kinetic intermediate in the folding of acyl-CoA binding protein detected by fluorescence labeling and ultrarapid mixing

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

A kinetic folding intermediate probed by native state hydrogen exchange

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

An amino acid code for protein folding

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

Forced unfolding of fibronectin type 3 modules: an analysis by biased molecular dynamics simulations

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

Effective energy function for proteins in solution

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

A structural comparison of the colicin immunity proteins Im7 and Im9 gives new insights into the molecular determinants of immunity-protein specificity

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

Molecular picture of folding of a small alpha/beta protein

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

Structure-based calculation of the equilibrium folding pathway of proteins. Correlation with hydrogen exchange protection factors.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

1H, 13C and 15N chemical shift referencing in biomolecular NMR

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

Equilibrium hydrogen exchange reveals extensive hydrogen bonded secondary structure in the on-pathway intermediate of Im7.

6 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0508667102

Beyond the EX1 limit: probing the structure of high-energy states in protein unfolding.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0508667102

Ultrarapid mixing experiments reveal that Im7 folds via an on-pathway intermediate

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0508667102

Rare fluctuations of native proteins sampled by equilibrium hydrogen exchange.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0508667102

Correlation between native-state hydrogen exchange and cooperative residue fluctuations from a simple model.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0508667102

Ultraviolet resonance Raman studies reveal the environment of tryptophan and tyrosine residues in the native and partially folded states of the E colicin-binding immunity protein Im7.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0508667102

Im7 folding mechanism: misfolding on a path to the native state

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

Latent and active p53 are identical in conformation

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1324994

Strategy for analysing the co-operativity of intramolecular interactions in peptides and proteins

28 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16371468

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Conformational dynamics of cytochrome c: correlation to hydrogen exchange

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16371468

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.0508667102

1 reference

31 July 2017

0 references

1 reference

31 July 2017

1 reference