Principles for applying optogenetic tools derived from direct comparative analysis of microbial opsins (Q34196212)

31 July 2017

Principles for applying optogenetic tools derived from direct comparative analysis of microbial opsins (English)

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31 July 2017

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10

Viviana Gradinaru

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Karl Deisseroth

12

Karl Deisseroth

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Minsuk Hyun

Minsuk Hyun

8

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Charu Ramakrishnan

Charu Ramakrishnan

4

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Ofer Yizhar

Ofer Yizhar

11

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Lisa Gunaydin

7

Lisa A Gunaydin

1 reference

31 July 2017

9

Lief E Fenno

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31 July 2017

5

Daniel J O'Shea

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31 July 2017

3

Emily A Ferenczi

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31 July 2017

1

Joanna Mattis

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31 July 2017

6

Rohit Prakash

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31 July 2017

2

Kay M Tye

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31 July 2017

18 December 2011

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31 July 2017

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31 July 2017

9

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31 July 2017

159-172

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31 July 2017

2

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PubMed ID

22179551

describes a project that uses

31 July 2017

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC4165888/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

exact match

https://scigraph.springernature.com/pub.10.1038/nmeth.1808

0 references

cites work

An expanded palette of genetically encoded Ca²⁺ indicators

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

A high-light sensitivity optical neural silencer: development and application to optogenetic control of non-human primate cortex

5 July 2018

1 reference

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Neocortical excitation/inhibition balance in information processing and social dysfunction

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

Optogenetics in neural systems

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

Excitatory transmission from the amygdala to nucleus accumbens facilitates reward seeking

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

New channelrhodopsin with a red-shifted spectrum and rapid kinetics from Mesostigma viride

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

The development and application of optogenetics

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

Optogenetic analysis of synaptic transmission in the central nervous system of the nematode Caenorhabditis elegans

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

High-efficiency channelrhodopsins for fast neuronal stimulation at low light levels

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

Amygdala circuitry mediating reversible and bidirectional control of anxiety

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

Habenula "cholinergic" neurons co-release glutamate and acetylcholine and activate postsynaptic neurons via distinct transmission modes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

Spiking patterns of neocortical L5 pyramidal neurons in vitro change with temperature

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

Cholinergic interneurons control local circuit activity and cocaine conditioning

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

Multiple retinol and retinal dehydrogenases catalyze all-trans-retinoic acid biosynthesis in astrocytes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

Single-cell optogenetic excitation drives homeostatic synaptic depression

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

Opto-current-clamp actuation of cortical neurons using a strategically designed channelrhodopsin

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

Voltage- and temperature-dependent gating of heterologously expressed channelrhodopsin-2

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

A user's guide to channelrhodopsin variants: features, limitations and future developments

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

Evolution of the channelrhodopsin photocycle model

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

Molecular and cellular approaches for diversifying and extending optogenetics

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

Ultrafast optogenetic control.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

High-performance genetically targetable optical neural silencing by light-driven proton pumps

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

Parvalbumin neurons and gamma rhythms enhance cortical circuit performance

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

Driving fast-spiking cells induces gamma rhythm and controls sensory responses

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

Phasic firing in dopaminergic neurons is sufficient for behavioral conditioning

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

Photocurrent attenuation by a single polar-to-nonpolar point mutation of channelrhodopsin-2.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

Characterization of engineered channelrhodopsin variants with improved properties and kinetics

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

Molecular determinants differentiating photocurrent properties of two channelrhodopsins from chlamydomonas.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

Bi-stable neural state switches

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

eNpHR: a Natronomonas halorhodopsin enhanced for optogenetic applications

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

A FLEX switch targets Channelrhodopsin-2 to multiple cell types for imaging and long-range circuit mapping

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

Red-shifted optogenetic excitation: a tool for fast neural control derived from Volvox carteri

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

Effects on capacitance by overexpression of membrane proteins.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

Targeting and readout strategies for fast optical neural control in vitro and in vivo

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

Spectral characteristics of the photocycle of channelrhodopsin-2 and its implication for channel function.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

Multimodal fast optical interrogation of neural circuitry

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

Multiple-color optical activation, silencing, and desynchronization of neural activity, with single-spike temporal resolution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

Ectopic expression of a microbial-type rhodopsin restores visual responses in mice with photoreceptor degeneration

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

Light activation of channelrhodopsin-2 in excitable cells of Caenorhabditis elegans triggers rapid behavioral responses

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

Fast noninvasive activation and inhibition of neural and network activity by vertebrate rhodopsin and green algae channelrhodopsin

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

Millisecond-timescale, genetically targeted optical control of neural activity

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

Channelrhodopsin-2, a directly light-gated cation-selective membrane channel

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

Cellular and network mechanisms of rhythmic recurrent activity in neocortex

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

5 July 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1808

Kinetic evaluation of photosensitivity in genetically engineered neurons expressing green algae light-gated channels.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1808

Ultra light-sensitive and fast neuronal activation with the Ca²+-permeable channelrhodopsin CatCh.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1808

Dynamics of retrieval strategies for remote memories.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1808

Synchronous neural afterdischarges in rat hippocampal slices without active chemical synapses.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.1808

Controlling the brain with light.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

Network synchrony in the nucleus accumbens in vivo.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4165888

28 October 2018

Identifiers

DOI

10.1038/NMETH.1808

1 reference

PubMed ID

22179551

Dimensions Publication ID

31 July 2017

0 references

1 reference

31 July 2017

1 reference

PubMed ID

22179551