LC-MS data processing with MAVEN: a metabolomic analysis and visualization engine (Q34184106)

31 July 2017

LC-MS data processing with MAVEN: a metabolomic analysis and visualization engine (English)

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31 July 2017

1 reference

1 reference

Michelle F Clasquin

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1 reference

PubMed ID

22389014

31 July 2017

Eugene Melamud

series ordinal

2

1 reference

PubMed ID

22389014

31 July 2017

Joshua D Rabinowitz

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3

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31 July 2017

1 March 2012

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Current Protocols in Bioinformatics

31 July 2017

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31 July 2017

Chapter 14

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31 July 2017

Unit14.11

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31 July 2017

Riboneogenesis in Yeast

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4055029

Large-scale 13C-flux analysis reveals distinct transcriptional control of respiratory and fermentative metabolism in Escherichia coli

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4055029

Metabolomics and its practical value in pharmaceutical industry

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4055029

Metabolomic analysis and visualization engine for LC-MS data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4055029

MZmine 2: modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4055029

Metabolomic analysis via reversed-phase ion-pairing liquid chromatography coupled to a stand alone orbitrap mass spectrometer

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4055029

Bacterial adaptation through distributed sensing of metabolic fluxes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4055029

A guided tour of the Trans-Proteomic Pipeline

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4055029

Cancer-associated IDH1 mutations produce 2-hydroxyglutarate

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4055029

Metabolic systems biology

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4055029

Systematic phenome analysis of Escherichia coli multiple-knockout mutants reveals hidden reactions in central carbon metabolism.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4055029

Metabolomics-driven quantitative analysis of ammonia assimilation in E. coli

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4055029

Metabolomics in pharmaceutical research and development: metabolites, mechanisms and pathways.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4055029

Systems-level metabolic flux profiling identifies fatty acid synthesis as a target for antiviral therapy

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4055029

Interferences and contaminants encountered in modern mass spectrometry

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4055029

Kinetic flux profiling for quantitation of cellular metabolic fluxes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4055029

XCMS2: processing tandem mass spectrometry data for metabolite identification and structural characterization

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4055029

Analytical strategies for LC-MS-based targeted metabolomics

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4055029

Metabolic flux analysis in a nonstationary system: fed-batch fermentation of a high yielding strain of E. coli producing 1,3-propanediol

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4055029

Multiple high-throughput analyses monitor the response of E. coli to perturbations

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4055029

Metabolic networks in motion: 13C-based flux analysis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4055029

XCMS: processing mass spectrometry data for metabolite profiling using nonlinear peak alignment, matching, and identification

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4055029

Uncovering transcriptional regulation of metabolism by using metabolic network topology

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4055029

Systems biology: Metabonomics

5 July 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI1411S37

Discovery metabolite profiling--forging functional connections between the proteome and metabolome

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI1411S37

A genome-scale computational study of the interplay between transcriptional regulation and metabolism

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI1411S37

Kinetic flux profiling of nitrogen assimilation in Escherichia coli.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI1411S37

(13)C-based metabolic flux analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1002%2F0471250953.BI1411S37

10.1002/0471250953.BI1411S37

21 January 2018

Identifiers

DOI

1 reference

31 July 2017

1 reference

31 July 2017

1 reference

PubMed ID

22389014