Complex restriction enzymes: NTP-driven molecular motors (Q34178514)

31 July 2017

1 reference

title

Complex restriction enzymes: NTP-driven molecular motors (English)

1 reference

31 July 2017

0 references

Aude A Bourniquel

1

1 reference

PubMed ID

12595133

31 July 2017

Thomas A Bickle

series ordinal

2

1 reference

31 July 2017

1 November 2002

1 reference

31 July 2017

1 reference

31 July 2017

84

1 reference

31 July 2017

11

1 reference

31 July 2017

1047-1059

1 reference

Type I restriction systems: sophisticated molecular machines (a legacy of Bertani and Weigle)

31 July 2017

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Nucleoside triphosphate-dependent restriction enzymes

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

EcoA: the first member of a new family of type I restriction modification systems. Gene organization and enzymatic activities

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

High-level expression of the cloned genes encoding the subunits of and intact DNA methyltransferase, M.EcoR124

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Purification and biochemical characterisation of theEcoR124 type I modification methylase

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

REBASE--restriction enzymes and methylases.

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

DNA restriction--modification genes of phage P1 and plasmid p15B. Structure and in vitro transcription

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Type III DNA restriction and modification systems EcoP1 and EcoP15. Nucleotide sequence of the EcoP1 operon, the EcoP15 mod gene and some EcoP1 mod mutants.

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

ATP-induced conformational changes in the restriction endonuclease from Escherichia coli K-12

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Translocation and specific cleavage of bacteriophage T7 DNA in vivo by EcoKI.

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Measuring motion on DNA by the type I restriction endonuclease EcoR124I using triplex displacement

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Reassortment of DNA recognition domains and the evolution of new specificities.

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Conservation of complex DNA recognition domains between families of restriction enzymes

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Conservation of organization in the specificity polypeptides of two families of type I restriction enzymes

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Two type I restriction enzymes from Salmonella species. Purification and DNA recognition sequences.

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Sequence diversity among related genes for recognition of specific targets in DNA molecules

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

A prediction of the amino acids and structures involved in DNA recognition by type I DNA restriction and modification enzymes

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Localization of a protein-DNA interface by random mutagenesis

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Surface labelling of the type I methyltransferase M.EcoR124I reveals lysine residues critical for DNA binding

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

The specificity of sty SKI, a type I restriction enzyme, implies a structure with rotational symmetry

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

A novel mutant of the type I restriction-modification enzyme EcoR124I is altered at a key stage of the subunit assembly pathway

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

A deletion mutant of the type IC restriction endonuclease EcoR1241 expressing a novel DNA specificity

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

The alternate expression of two restriction and modification systems

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Basis for changes in DNA recognition by the EcoR124 and EcoR124/3 type I DNA restriction and modification enzymes

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

DNA restriction and modification systems in Salmonella. SQ, a new system derived by recombination between the SB system of Salmonella typhimurium and the SP system of Salmonella potsdam.

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Genetic recombination can generate altered restriction specificity

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

A hybrid recognition sequence in a recombinant restriction enzyme and the evolution of DNA sequence specificity.

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Novel type I restriction specificities through domain shuffling of HsdS subunits in Lactococcus lactis.

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

The hsd loci of Mycoplasma pulmonis: organization, rearrangements and expression of genes

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

A family of phase-variable restriction enzymes with differing specificities generated by high-frequency gene rearrangements

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Roles of selection and recombination in the evolution of type I restriction-modification systems in enterobacteria

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Conservation of motifs within the unusually variable polypeptide sequences of type I restriction and modification enzymes

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

The type IC hsd loci of the enterobacteria are flanked by DNA with high homology to the phage P1 genome: implications for the evolution and spread of DNA restriction systems.

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Combinational variation of restriction modification specificities in Lactococcus lactis.

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

A mutational analysis of the two motifs common to adenine methyltransferases.

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Mutations the confer de Novo activity upon a maintenance methyltransferase

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

DNA recognition by the EcoK methyltransferase. The influence of DNA methylation and the cofactor S-adenosyl-L-methionine

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

The DNA binding characteristics of the trimeric EcoKI methyltransferase and its partially assembled dimeric form determined by fluorescence polarisation and DNA footprinting

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

S-adenosyl methionine alters the DNA contacts of the EcoKI methyltransferase

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Substrate recognition and selectivity in the type IC DNA modification methylase M.EcoR124I.

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

High resolution footprinting of a type I methyltransferase reveals a large structural distortion within the DNA recognition site

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

The HsdR subunit of R.EcoR124II: cloning and over-expression of the gene and unexpected properties of the subunit

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Sequence-specific DNA binding by EcoKI, a type IA DNA restriction enzyme

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Multiple steps in DNA recognition by restriction endonuclease from E. coli K

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Endonuclease (R) subunits of type-I and type-III restriction-modification enzymes contain a helicase-like domain

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

On the structure and operation of type I DNA restriction enzymes

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Crystal structures of complexes of PcrA DNA helicase with a DNA substrate indicate an inchworm mechanism

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Recognition and cleavage of DNA by type-II restriction endonucleases

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Single amino acid substitutions in the HsdR subunit of the type IB restriction enzyme EcoAI uncouple the DNA translocation and DNA cleavage activities of the enzyme

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

EcoKI with an amino acid substitution in any one of seven DEAD-box motifs has impaired ATPase and endonuclease activities

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

The DNA translocation and ATPase activities of restriction-deficient mutants of Eco KI.

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

FokI dimerization is required for DNA cleavage

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Structure of FokI has implications for DNA cleavage

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

New restriction endonucleases from Flavobacterium okeanokoites (FokI) and Micrococcus luteus (MluI).

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Model for how type I restriction enzymes select cleavage sites in DNA.

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Repercussions of DNA tracking by the type IC restriction endonuclease EcoR124I on linear, circular and catenated substrates.

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

DNA supercoiling during ATP-dependent DNA translocation by the type I restriction enzyme EcoAI

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

The type I restriction endonuclease R.EcoR124I: over-production and biochemical properties.

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

DNA translocation blockage, a general mechanism of cleavage site selection by type I restriction enzymes

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

DNA cleavage by the type IC restriction-modification enzyme EcoR124II

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Kinetic models of translocation, head-on collision, and DNA cleavage by type I restriction endonucleases

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Direct observation of DNA translocation and cleavage by the EcoKI endonuclease using atomic force microscopy

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Translocation-independent dimerization of the EcoKI endonuclease visualized by atomic force microscopy

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

ATPase activity of the type IC restriction-modification system EcoR124II.

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Functional analysis of conserved motifs in EcoP15I DNA methyltransferase

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Interaction of EcoP15I DNA methyltransferase with oligonucleotides containing the asymmetric sequence 5'-CAGCAG-3'.

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

DNA recognition by the EcoP15I and EcoPI modification methyltransferases

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Probing the role of cysteine residues in the EcoP15I DNA methyltransferase

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Binding of EcoP15I DNA methyltransferase to DNA reveals a large structural distortion within the recognition sequence

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Type III restriction enzymes need two inversely oriented recognition sites for DNA cleavage

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

S-adenosyl-L-methionine is required for DNA cleavage by type III restriction enzymes

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Subunit assembly and mode of DNA cleavage of the type III restriction endonucleases EcoP1I and EcoP15I.

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

DNA cleavage by type III restriction-modification enzyme EcoP15I is independent of spacer distance between two head to head oriented recognition sites

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Host specificity of DNA produced by Escherichia coli. I. Host controlled modification of bacteriophage lambda

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Nucleotide sequence of the BsuRI restriction-modification system.

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Cytosine-specific DNA modification interferes with plasmid establishment in Escherichia coli K12: involvement of rglB.

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Escherichia coli K-12 restricts DNA containing 5-methylcytosine

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Nucleotide sequence of the McrB region of Escherichia coli K-12 and evidence for two independent translational initiation sites at the mcrB locus

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Genetic and sequence organization of the mcrBC locus of Escherichia coli K-12.

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Site-specific methylases induce the SOS DNA repair response in Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Organization and function of the mcrBC genes of Escherichia coli K‐12

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Identification of a second polypeptide required for McrB restriction of 5-methylcytosine-containing DNA in Escherichia coli K12.

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Characterization of the mcrBC region of Escherichia coli K-12 wild-type and mutant strains

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

The recognition of methylated DNA by the GTP-dependent restriction endonuclease McrBC resides in the N-terminal domain of McrB

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

McrBs, a modulator peptide for McrBC activity.

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

The McrBC endonuclease translocates DNA in a reaction dependent on GTP hydrolysis.

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

The GTP-binding domain of McrB: more than just a variation on a common theme?

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

A mutational analysis of the PD...D/EXK motif suggests that McrC harbors the catalytic center for DNA cleavage by the GTP-dependent restriction enzyme McrBC from Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

McrBC: a multisubunit GTP-dependent restriction endonuclease

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

The McrBC restriction endonuclease assembles into a ring structure in the presence of G nucleotides

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

McrB: a prokaryotic protein specifically recognizing DNA containing modified cytosine residues.

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Methyl-specific DNA binding by McrBC, a modification-dependent restriction enzyme

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

The GTP-dependent restriction enzyme McrBC from Escherichia coli forms high-molecular mass complexes with DNA and produces a cleavage pattern with a characteristic 10-base pair repeat.

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Characterization of the interaction between the restriction endonuclease McrBC from E. coli and its cofactor GTP.

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

Complexes formed between the restriction endonuclease EcoK and heteroduplex DNA

1 reference

https://api.crossref.org/works/10.1016%2FS0300-9084%2802%2900020-2

7 January 2021

10.1016/S0300-9084(02)00020-2

Identifiers

DOI

1 reference

31 July 2017

1 reference

PubMed ID

12595133