Conducting-state properties of the KcsA potassium channel from molecular and Brownian dynamics simulations. (Q34177123)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11806907%20AND%20SRC:MED&resulttype=core&format=json

6 December 2019

title

Conducting-state properties of the KcsA potassium channel from molecular and Brownian dynamics simulations (English)

1 reference

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6 December 2019

2

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6 December 2019

Serdar Kuyucak

3

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ORCID Public Data File 2021

author name string

Shin-Ho Chung

series ordinal

1

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6 December 2019

language of work or name

English

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publication date

1 February 2002

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6 December 2019

number of pages

18

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based on heuristic

inferred from page(s)

published in

Biophysical Journal

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6 December 2019

volume

82

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6 December 2019

issue

2

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6 December 2019

page(s)

628-645

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What are the dielectric "constants" of proteins and how to validate electrostatic models?

6 December 2019

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301874

Dielectric properties of proteins from simulation: the effects of solvent, ligands, pH, and temperature

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301874

Side-chain ionization states in a potassium channel

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301874

Mechanisms of permeation and selectivity in calcium channels

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301874

Ion channels, permeation, and electrostatics: insight into the function of KcsA.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301874

A computational study of ion binding and protonation states in the KcsA potassium channel.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301874

Molecular dynamics estimates of ion diffusion in model hydrophobic and KcsA potassium channels.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301874

Molecular dynamics of the KcsA K(+) channel in a bilayer membrane

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301874

Ion permeation mechanism of the potassium channel

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301874

Simulations of ion permeation through a potassium channel: molecular dynamics of KcsA in a phospholipid bilayer

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301874

Permeation of ions across the potassium channel: Brownian dynamics studies

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301874

Molecular dynamics study of the KcsA potassium channel

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301874

Gating properties of single SK channels in hippocampal CA1 pyramidal neurons

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301874

Single streptomyces lividans K(+) channels: functional asymmetries and sidedness of proton activation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301874

Structural rearrangements underlying K+-channel activation gating

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301874

Effective energy function for proteins in solution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301874

Study of ionic currents across a model membrane channel using Brownian dynamics

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301874

Three-dimensional architecture and gating mechanism of a K+ channel studied by EPR spectroscopy

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301874

pH-dependent gating in the Streptomyces lividans K+ channel

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301874

The Structure of the Potassium Channel: Molecular Basis of K+ Conduction and Selectivity

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301874

Brownian dynamics study of ion transport in the vestibule of membrane channels

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301874

The dielectric properties of water within model transbilayer pores.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301874

Energy barrier presented to ions by the vestibule of the biological membrane channel

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301874

Roles of electrostatic interaction in proteins.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301874

Internal and interfacial dielectric properties of cytochrome c from molecular dynamics in aqueous solution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301874

Ionic selectivity, saturation, and block in a K+-selective channel from sarcoplasmic reticulum

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301874

Delayed activation of large-conductance Ca2+-activated K channels in hippocampal neurons of the rat.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301874

Ionic channels in ocular epithelia

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301874

Multiple types of voltage-dependent Ca2+-activated K+ channels of large conductance in rat brain synaptosomal membranes.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301874

Water and potassium dynamics inside the KcsA K(+) channel.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301874

Potassium and sodium ions in a potassium channel studied by molecular dynamics simulations

28 October 2018

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975427-1

CHARMM: A program for macromolecular energy, minimization, and dynamics calculations

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975427-1

Potassium and sodium binding to the outer mouth of the K+ channel

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975427-1

Exploring the open pore of the potassium channel from Streptomyces lividans

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975427-1

10.1016/S0006-3495(02)75427-1

7 January 2021

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DOI

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11806907%20AND%20SRC:MED&resulttype=core&format=json

6 December 2019

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6 December 2019

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