Predicting protein folding rates using the concept of Chou's pseudo amino acid composition (Q34165172)

Dataset for "Continued use of retracted papers: Temporal trends in citations and (lack of) awareness of retractions shown in citation contexts in biomedicine"

31 July 2017

2 references

Continued use of retracted papers: Temporal trends in citations and (lack of) awareness of retractions shown in citation contexts in biomedicine

title

Predicting protein folding rates using the concept of Chou's pseudo amino acid composition (English)

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31 July 2017

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Jianxiu Guo

1

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31 July 2017

Nini Rao

2

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31 July 2017

Guangxiong Liu

3

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31 July 2017

Yong Yang

4

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31 July 2017

Gang Wang

5

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31 July 2017

15 February 2011

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Journal of Computational Chemistry

31 July 2017

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31 July 2017

32

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31 July 2017

8

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31 July 2017

1612-1617

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Fast kinetics and mechanisms in protein folding

31 July 2017

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Protein folding studied by real-time NMR spectroscopy.

21 January 2018

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Methods to study protein folding by stopped-flow FT-IR.

21 January 2018

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The analysis of protein folding kinetic data produced in protein engineering experiments

21 January 2018

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Protein folding: the stepwise assembly of foldon units

21 January 2018

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Mapping protein energy landscapes with amide hydrogen exchange and mass spectrometry: I. A generalized model for a two-state protein and comparison with experiment.

21 January 2018

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Protein folding: defining a "standard" set of experimental conditions and a preliminary kinetic data set of two-state proteins

21 January 2018

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Contact order, transition state placement and the refolding rates of single domain proteins.

21 January 2018

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Comparison between long-range interactions and contact order in determining the folding rate of two-state proteins: application of long-range order to folding rate prediction.

21 January 2018

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Folding rate prediction using total contact distance

21 January 2018

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Folding kinetics of two-state proteins: effect of circularization, permutation, and crosslinks.

21 January 2018

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Structural determinants of the rate of protein folding.

21 January 2018

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Contact order revisited: influence of protein size on the folding rate

21 January 2018

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Prediction of protein folding rates from the amino acid sequence-predicted secondary structure.

21 January 2018

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A simple parameter relating sequences with folding rates of small alpha helical proteins.

21 January 2018

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Protein folding rates estimated from contact predictions.

21 January 2018

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Amino acid sequence predicts folding rate for middle-size two-state proteins

21 January 2018

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FOLD-RATE: prediction of protein folding rates from amino acid sequence

21 January 2018

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Direct correlation between proteins' folding rates and their amino acid compositions: an ab initio folding rate prediction.

21 January 2018

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Analysis and prediction of protein folding rates using quadratic response surface models.

21 January 2018

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Predicting protein folding rates from geometric contact and amino acid sequence

21 January 2018

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Prediction of protein folding rates from primary sequences using hybrid sequence representation

21 January 2018

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Prediction of protein cellular attributes using pseudo-amino acid composition

21 January 2018

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Protein subcellular location prediction

21 January 2018

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First principles prediction of protein folding rates

21 January 2018

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PFD: a database for the investigation of protein folding kinetics and stability

21 January 2018

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K-Fold: a tool for the prediction of the protein folding kinetic order and rate.

21 January 2018

1 reference

Using amphiphilic pseudo amino acid composition to predict enzyme subfamily classes

21 January 2018

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Prediction of subcellular localization of apoptosis protein using Chou's pseudo amino acid composition

21 January 2018

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Using the concept of Chou's pseudo amino acid composition to predict protein subcellular localization: an approach by incorporating evolutionary information and von Neumann entropies

21 January 2018

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Using the concept of Chou's pseudo amino acid composition to predict apoptosis proteins subcellular location: an approach by approximate entropy

21 January 2018

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Predicting protein subcellular location using Chou's pseudo amino acid composition and improved hybrid approach

21 January 2018

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A new method for predicting the subcellular localization of eukaryotic proteins with both single and multiple sites: Euk-mPLoc 2.0

21 January 2018

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Using Chou's pseudo amino acid composition based on approximate entropy and an ensemble of AdaBoost classifiers to predict protein subnuclear location.

21 January 2018

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Using Chou’s pseudo amino acid composition to predict subcellular localization of apoptosis proteins: An approach with immune genetic algorithm-based ensemble classifier

21 January 2018

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Prediction of protein structural classes by Chou's pseudo amino acid composition: approached using continuous wavelet transform and principal component analysis

21 January 2018

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Genetic programming for creating Chou's pseudo amino acid based features for submitochondria localization

21 January 2018

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Using Chou's pseudo amino acid composition to predict protein quaternary structure: a sequence-segmented PseAAC approach

21 January 2018

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Prediction of G-protein-coupled receptor classes based on the concept of Chou's pseudo amino acid composition: an approach from discrete wavelet transform.

21 January 2018

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Prediction of G-protein-coupled receptor classes in low homology using Chou's pseudo amino acid composition with approximate entropy and hydrophobicity patterns

21 January 2018

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Using the concept of Chou's pseudo amino acid composition for risk type prediction of human papillomaviruses

21 January 2018

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The modified Mahalanobis Discriminant for predicting outer membrane proteins by using Chou's pseudo amino acid composition.

21 January 2018

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Prediction of protein secondary structure content by using the concept of Chou's pseudo amino acid composition and support vector machine

21 January 2018

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Predicting subcellular localization of mycobacterial proteins by using Chou's pseudo amino acid composition.

21 January 2018

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Predicting lipase types by improved Chou's pseudo-amino acid composition

21 January 2018

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Predicting DNA-binding proteins: approached from Chou's pseudo amino acid composition and other specific sequence features

21 January 2018

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Using the concept of Chou's pseudo amino acid composition to predict enzyme family classes: an approach with support vector machine based on discrete wavelet transform

21 January 2018

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Using Chou's amphiphilic pseudo-amino acid composition and support vector machine for prediction of enzyme subfamily classes

21 January 2018

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Prediction of cell wall lytic enzymes using Chou's amphiphilic pseudo amino acid composition

21 January 2018

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Predicting the cofactors of oxidoreductases based on amino acid composition distribution and Chou's amphiphilic pseudo-amino acid composition

21 January 2018

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Using the augmented Chou's pseudo amino acid composition for predicting protein submitochondria locations based on auto covariance approach

21 January 2018

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Some factors in the interpretation of protein denaturation

21 January 2018

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21 January 2018

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Prediction of Protein Structural Classes

21 January 2018

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Cell-PLoc: a package of Web servers for predicting subcellular localization of proteins in various organisms

21 January 2018

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Recent progress in protein subcellular location prediction

21 January 2018

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An intriguing controversy over protein structural class prediction

21 January 2018

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Subcellular location prediction of apoptosis proteins

21 January 2018

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Influence of medium- and long-range interactions in different folding types of globular proteins.

21 January 2018

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Inter-residue interactions in protein folding and stability

21 January 2018

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Unspecific hydrophobic stabilization of folding transition states

21 January 2018

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Prediction of protein secondary structure content using amino acid composition and evolutionary information.

21 January 2018

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Application of multiple sequence alignment profiles to improve protein secondary structure prediction

21 January 2018

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Chain length is the main determinant of the folding rate for proteins with three-state folding kinetics

21 January 2018

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A statistical model for predicting protein folding rates from amino acid sequence with structural class information

21 January 2018

1 reference

9 February 2024

https://opencitations.net/index/api/v1/references/10.1002/JCC.21740

Influence of medium and long range interactions in different structural classes of globular proteins

1 reference

9 February 2024

https://opencitations.net/index/api/v1/references/10.1002/JCC.21740

Chain Length Scaling of Protein Folding Time

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9 February 2024

https://opencitations.net/index/api/v1/references/10.1002/JCC.21740

Folding rate prediction using n-order contact distance for proteins with two- and three-state folding kinetics

1 reference

9 February 2024

https://opencitations.net/index/api/v1/references/10.1002/JCC.21740

Rate of protein folding near the point of thermodynamic equilibrium between the coil and the most stable chain fold

1 reference

9 February 2024

https://opencitations.net/index/api/v1/references/10.1002/JCC.21740

Accurate prediction of protein folding rates from sequence and sequence-derived residue flexibility and solvent accessibility.

1 reference

9 February 2024

https://opencitations.net/index/api/v1/references/10.1002/JCC.21740

Local secondary structure content predicts folding rates for simple, two-state proteins

1 reference

9 February 2024

https://opencitations.net/index/api/v1/references/10.1002/JCC.21740

Identifiers

DOI

10.1002/JCC.21740

1 reference

31 July 2017

1 reference