Identification and localisation of the NB-LRR gene family within the potato genome (Q34159574)

31 July 2017

Identification and localisation of the NB-LRR gene family within the potato genome (English)

1 reference

31 July 2017

10

1 reference

31 July 2017

1

Florian Jupe

1 reference

31 July 2017

Graham J Etherington

3

0 references

Leighton Pritchard

Leighton Pritchard

2

0 references

Dan Bolser

Dan Bolser

8

0 references

Ingo Hein

Ingo Hein

11

0 references

Sanjeev Kumar Sharma

Sanjeev Kumar Sharma

7

0 references

Glenn J Bryan

Glenn J Bryan

9

0 references

Peter J Cock

5

Peter J A Cock

1 reference

31 July 2017

Katrin Mackenzie

4

1 reference

31 July 2017

Frank Wright

6

1 reference

31 July 2017

language of work or name

English

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publication date

15 February 2012

1 reference

31 July 2017

1 reference

31 July 2017

13

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31 July 2017

75

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-13-75

31 July 2017

0 references

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A genome-wide genetic map of NB-LRR disease resistance loci in potato

28 July 2018

1 reference

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Cell death mediated by the N-terminal domains of a unique and highly conserved class of NB-LRR protein.

28 July 2018

1 reference

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The value of position-specific priors in motif discovery using MEME.

28 July 2018

1 reference

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The Pfam protein families database

28 July 2018

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Genome-wide identification of NBS-encoding resistance genes in Brassica rapa

28 July 2018

1 reference

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TIR-NBS-LRR genes are rare in monocots: evidence from diverse monocot orders.

28 July 2018

1 reference

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Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans

28 July 2018

1 reference

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NB-LRRs work a "bait and switch" on pathogens.

28 July 2018

1 reference

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STANDing strong, resistance proteins instigators of plant defence

28 July 2018

1 reference

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Biopython: freely available Python tools for computational molecular biology and bioinformatics

28 July 2018

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A probabilistic model of local sequence alignment that simplifies statistical significance estimation

28 July 2018

1 reference

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The evolution of resistance genes in multi-protein plant resistance systems

28 July 2018

1 reference

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Plant NBS-LRR proteins: adaptable guards

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297505

The Rpi-blb2 gene from Solanum bulbocastanum is an Mi-1 gene homolog conferring broad-spectrum late blight resistance in potato.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297505

The late blight resistance locus Rpi-bib3 from Solanum bulbocastanum belongs to a major late blight R gene cluster on chromosome 4 of potato

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297505

Tandem and segmental gene duplication and recombination in the evolution of plant disease resistance gene

28 July 2018

1 reference

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An ancient R gene from the wild potato species Solanum bulbocastanum confers broad-spectrum resistance to Phytophthora infestans in cultivated potato and tomato

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297505

Cloning and characterization of the durable tomato mosaic virus resistance gene Tm-2(2) from Lycopersicon esculentum

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297505

Genome-Level Evolution of Resistance Genes in Arabidopsis thaliana

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297505

Gene RB cloned from Solanum bulbocastanum confers broad spectrum resistance to potato late blight

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297505

The Pfam protein families database

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297505

Agrobacterium transient expression system as a tool for the isolation of disease resistance genes: application to the Rx2 locus in potato.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297505

Plant disease resistance genes encode members of an ancient and diverse protein family within the nucleotide-binding superfamily

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297505

Plant disease-resistance proteins and the gene-for-gene concept

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297505

The root knot nematode resistance gene Mi from tomato is a member of the leucine zipper, nucleotide binding, leucine-rich repeat family of plant genes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297505

The NB-ARC domain: a novel signalling motif shared by plant resistance gene products and regulators of cell death in animals

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297505

The I2C family from the wilt disease resistance locus I2 belongs to the nucleotide binding, leucine-rich repeat superfamily of plant resistance genes.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297505

Fitting a mixture model by expectation maximization to discover motifs in biopolymers

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297505

Basic local alignment search tool

28 July 2018

1 reference

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28 July 2018

The plant immune system

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-75

TIR-X and TIR-NBS proteins: two new families related to disease resistance TIR-NBS-LRR proteins encoded in Arabidopsis and other plant genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-75

Genome-wide analysis of NBS-LRR-encoding genes in Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-75

Genome-wide comparison of nucleotide-binding site-leucine-rich repeat-encoding genes in Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-75

A novel gene family in moss (Physcomitrella patens) shows sequence homology and a phylogenetic relationship with the TIR-NBS class of plant disease resistance genes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-75

Diversity, distribution, and ancient taxonomic relationships within the TIR and non-TIR NBS-LRR resistance gene subfamilies.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-75

Cloning of resistance gene analogs located on the alien chromosome in an addition line of wheat-Thinopyrum intermedium.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-75

Resistance gene complexes: evolution and utilization

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-75

The coiled-coil and nucleotide binding domains of the Potato Rx disease resistance protein function in pathogen recognition and signaling.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-75

Methods and statistics for combining motif match scores

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-75

Paircoil2: improved prediction of coiled coils from sequence.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-75

Rpi-vnt1.1, a Tm-2(2) homolog from Solanum venturii, confers resistance to potato late blight.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-75

Motifs specific for the ADR1 NBS-LRR protein family in Arabidopsis are conserved among NBS-LRR sequences from both dicotyledonous and monocotyledonous plants.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-75

Mapping and cloning of late blight resistance genes from Solanum venturii using an interspecific candidate gene approach

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-75

Exploiting knowledge of R/Avr genes to rapidly clone a new LZ-NBS-LRR family of late blight resistance genes from potato linkage group IV.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-75

Comparative genomics enabled the isolation of the R3a late blight resistance gene in potato.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-75

The R1 gene for potato resistance to late blight (Phytophthora infestans) belongs to the leucine zipper/NBS/LRR class of plant resistance genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-75

The R1 resistance gene cluster contains three groups of independently evolving, type I R1 homologues and shows substantial structural variation among haplotypes of Solanum demissum.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-75

The broad-spectrum tospovirus resistance gene Sw-5 of tomato is a homolog of the root-knot nematode resistance gene Mi.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-75

Recent insights into R gene evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-75

The R3 resistance to Phytophthora infestans in potato is conferred by two closely linked R genes with distinct specificities.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-75

TOPALi v2: a rich graphical interface for evolutionary analyses of multiple alignments on HPC clusters and multi-core desktops.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-75

Improving the efficiency of SPR moves in phylogenetic tree search methods based on maximum likelihood

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-75

Clusters of resistance genes in plants evolve by divergent selection and a birth-and-death process

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3297505

Genome-wide investigation on the genetic variations of rice disease resistance genes

28 October 2018

1 reference

12 December 2020

Cloning and characterization of r3b; members of the r3 superfamily of late blight resistance genes show sequence and functional divergence

1 reference

12 December 2020

A molecular evolutionary concept connecting nonhost resistance, pathogen host range, and pathogen speciation

1 reference

12 December 2020

Recent duplications dominate NBS-encoding gene expansion in two woody species

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2164-13-75

1 reference

Dimensions Publication ID

31 July 2017

0 references

1 reference

31 July 2017

1 reference