Integrating genomics, bioinformatics, and classical genetics to study the effects of recombination on genome evolution (Q34135136)

31 July 2017

Integrating genomics, bioinformatics, and classical genetics to study the effects of recombination on genome evolution (English)

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31 July 2017

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John A Birdsell

1

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31 July 2017

1 July 2002

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Molecular Biology and Evolution

31 July 2017

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31 July 2017

19

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31 July 2017

1181-1197

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31 July 2017

7

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

31 July 2017

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

Diversity in G + C content at the third position of codons in vertebrate genes and its cause

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

Escherichia coli mutY gene product is required for specific A-G----C.G mismatch correction

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

Clustering of meiotic double-strand breaks on yeast chromosome III

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

Compositional constraints and genome evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

DNA mismatch repair catalyzed by extracts of mitotic, postmitotic, and senescent Drosophila tissues and involvement of mei-9 gene function for full activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

Specificity of mismatch repair following transformation of Saccharomyces cerevisiae with heteroduplex plasmid DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

G+C content variation along and among Saccharomyces cerevisiae chromosomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

Dual roles for DNA sequence identity and the mismatch repair system in the regulation of mitotic crossing-over in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

Spectrum of spontaneous mutation at the APRT locus of Chinese hamster ovary cells: an analysis at the DNA sequence level

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

The elevated GC content at exonic third sites is not evidence against neutralist models of isochore evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

An isochore transition in the NF1 gene region coincides with a switch in the extent of linkage disequilibrium

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

The mammalian pseudoautosomal region

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

Evidence that both G + C rich and G + C poor isochores are replicated early and late in the cell cycle

21 January 2018

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https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

The evolution of isochores

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

Correlation between molecular clock ticking, codon usage fidelity of DNA repair, chromosome banding and chromatin compactness in germline cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

Why the rate of silent codon substitutions is variable within a vertebrate's genome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

Global mapping of meiotic recombination hotspots and coldspots in the yeast Saccharomyces cerevisiae

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

A model for the correlation of mutation rate with GC content and the origin of GC-rich isochores.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

Small introns tend to occur in GC-rich regions in some but not all vertebrates

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

Evident diversity of codon usage patterns of human genes with respect to chromosome banding patterns and chromosome numbers; relation between nucleotide sequence data and cytogenetic data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

Heteroduplex DNA correction in Saccharomyces cerevisiae is mismatch specific and requires functional PMS genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

Oxidized, deaminated cytosines are a source of C --> T transitions in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

The yeast rad18 mutator specifically increases G.C----T.A transversions without reducing correction of G-A or C-T mismatches to G.C pairs

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

Does recombination improve selection on codon usage? Lessons from nematode and fly complete genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

The isochore organization and the compositional distribution of homologous coding sequences in the nuclear genome of plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

Assessment of compositional heterogeneity within and between eukaryotic genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

Efficient repair of A/C mismatches in mouse cells deficient in long-patch mismatch repair

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

A gene spans the pseudoautosomal boundary in mice

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

Evolutionary rate of a gene affected by chromosomal position.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

Meiotic recombination hot spots and cold spots

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

Patterns of nucleotide substitution in Drosophila and mammalian genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

5-Methylcytosine is not detectable in Saccharomyces cerevisiae DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

Selective constraint in intergenic regions of human and mouse genomes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

Regional base composition variation along yeast chromosome III: evolution of chromosome primary structure

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

Synonymous codon bias is not caused by mutation bias in G+C-rich genes in humans.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

On the genetic basis of variation and heterogeneity of DNA base composition

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

Local changes in GC/AT substitution biases and in crossover frequencies on Drosophila chromosomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

Molecular keys to speciation: DNA polymorphism and the control of genetic exchange in enterobacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

Dependence of intrachromosomal recombination in mammalian cells on uninterrupted homology

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

Mismatch-specific thymine DNA glycosylase and DNA polymerase beta mediate the correction of G.T mispairs in nuclear extracts from human cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

PAML: a program package for phylogenetic analysis by maximum likelihood

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

5-Methylcytosine DNA glycosylase activity is also present in the human MBD4 (G/T mismatch glycosylase) and in a related avian sequence

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

Patterns of nucleotide substitution in pseudogenes and functional genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

Nonrandomness of point mutation as reflected in nucleotide substitutions in pseudogenes and its evolutionary implications

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A004176

Initial sequencing and analysis of the human genome

21 January 2018

1 reference

28 May 2022

https://opencitations.net/index/coci/api/v1/citations/10.1038/35057062

Identifiers

DOI

10.1093/OXFORDJOURNALS.MOLBEV.A004176

1 reference

release_x5bmpbzitvep3lbhbe6qb2sgki

31 July 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/x5bmpbzitvep3lbhbe6qb2sgki

mapped directly with Wikidata item

24 November 2022

based on heuristic

PubMed ID

12082137

1 reference

PubMed ID

12082137