AraC protein, regulation of the l-arabinose operon in Escherichia coli, and the light switch mechanism of AraC action (Q34116834)

31 July 2017

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title

AraC protein, regulation of the l-arabinose operon in Escherichia coli, and the light switch mechanism of AraC action (English)

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31 July 2017

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Robert Schleif

1

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publication date

8 April 2010

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FEMS Microbiology Reviews

31 July 2017

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31 July 2017

34

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31 July 2017

779-796

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31 July 2017

5

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The carboxyl terminus of the bacteriophage T4 DNA polymerase is required for holoenzyme complex formation

31 July 2017

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Genetic evidence that transcription activation by RhaS involves specific amino acid contacts with sigma 70.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

lac Repressor-operator interaction. VI. The natural inducer of the lac operon.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Determining residue-base interactions between AraC protein and araI DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Functional domains of the AraC protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Regulation of the regulatory gene for the arabinose pathway, araC

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Molecular mechanism of NPF recognition by EH domains

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Constitutive mutations in the Escherichia coli AraC protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Roles of effectors in XylS-dependent transcription activation: intramolecular domain derepression and DNA binding

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

An operator at -280 base pairs that is required for repression of araBAD operon promoter: addition of DNA helical turns between the operator and promoter cyclically hinders repression

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

DNA-dependent renaturation of an insoluble DNA binding protein. Identification of the RhaS binding site at rhaBAD.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

The L-arabinose operon in Escherichia coli B-r: a genetic demonstration of two functional states of the product of a regulator gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

A DNA-assisted binding assay for weak protein-protein interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Equilibria and kinetics of lac repressor-operator interactions by polyacrylamide gel electrophoresis

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

A gel electrophoresis method for quantifying the binding of proteins to specific DNA regions: application to components of the Escherichia coli lactose operon regulatory system

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

A portable allosteric mechanism

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Transcription of Escherichia coli ara in vitro. The cyclic AMP receptor protein requirement for PBAD induction that depends on the presence and orientation of the araO2 site.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

The role of rigidity in DNA looping-unlooping by AraC

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Regulation of the Escherichia coli l-arabinose operon studied by gel electrophoresis DNA binding assay

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

A dimer of AraC protein contacts three adjacent major groove regions of the araI DNA site

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Electron microscopy of gene regulation: the L-arabinose operon

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

In vivo experiments on the mechanism of action of L-arabinose C gene activator and lactose repressor.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Genetic reconstitution of the high-affinity L-arabinose transport system

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

In vivo induction kinetics of the arabinose promoters in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Crystal structure of the Escherichia coli Rob transcription factor in complex with DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

In vivo DNA loops in araCBAD: size limits and helical repeat

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Identification of a protein binding site on the surface of the alphavirus nucleocapsid and its implication in virus assembly

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Directed evolution of AraC for improved compatibility of arabinose- and lactose-inducible promoters

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

The regulatory region of the l-arabinose operon: Its isolation on a 1000 base-pair fragment from DNA heteroduplexes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

DNA looping and unlooping by AraC protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

AraC-DNA looping: Orientation and distance-dependent loop breaking by the cyclic AMP receptor protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Structure of Vibrio cholerae ToxT reveals a mechanism for fatty acid regulation of virulence genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Crystal structure of the nucleosome core particle at 2.8 A resolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Dissecting the functional program of Escherichia coli promoters: the combined mode of action of Lac repressor and AraC activator

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

The carboxy-terminal tail of the homeo domain protein alpha 2 is required for function with a second homeo domain protein.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

The DNA loop model for ara repression: AraC protein occupies the proposed loop sites in vivo and repression-negative mutations lie in these same sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

The Escherichia coli L-arabinose operon: binding sites of the regulatory proteins and a mechanism of positive and negative regulation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Modulation of AraC family member activity by protein ligands.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Mapping, sequence, and apparent lack of function of araJ, a gene of the Escherichia coli arabinose regulon

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

A novel DNA-binding motif in MarA: the first structure for an AraC family transcriptional activator

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

DNA tape measurements of AraC

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Solution structure of the DNA binding domain of AraC protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Functional modes of the regulatory arm of AraC.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Mutational analysis of residue roles in AraC function

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Crystal structure of the p27Kip1 cyclin-dependent-kinase inhibitor bound to the cyclin A-Cdk2 complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Arm-domain interactions in AraC.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

An l-arabinose binding protein and arabinose permeation in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Fine-Structure Deletion Map of the Escherichia coli L-Arabinose Operon

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Regulation of the L-arabinose operon of Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

AraC protein: a love-hate relationship.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Hyperproduction of araC protein from Escherichia coli.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

The regulatory region of the L-arabinose operon: a physical, genetic and physiological study

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Apo-AraC actively seeks to loop.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Gene expression from plasmids containing the araBAD promoter at subsaturating inducer concentrations represents mixed populations.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Structural basis for ligand-regulated oligomerization of AraC

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Overproducing araC protein with lambda-arabinose transducing phage

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

The araE low affinity L-arabinose transport promoter. Cloning, sequence, transcription start site and DNA binding sites of regulatory proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Rhodopsin's carboxy-terminal cytoplasmic tail acts as a membrane receptor for cytoplasmic dynein by binding to the dynein light chain Tctex-1

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

AraC regulatory protein mutants with altered effector specificity

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Peptide-in-groove interactions link target proteins to the beta-propeller of clathrin

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Biochemical and physiological properties of the DNA binding domain of AraC protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Positive regulation of the Escherichia coli L-rhamnose operon is mediated by the products of tandemly repeated regulatory genes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Complementation in beta-galactosidase: from protein structure to genetic engineering

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Characterization by in vitro complementation of a peptide corresponding to an operator-proximal segment of the β-galactosidase structural gene of Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

The guanine nucleotide-binding switch in three dimensions

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Structure and properties of a truely apo form of AraC dimerization domain

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Amino acid contacts between sigma 70 domain 4 and the transcription activators RhaS and RhaR.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Mapping arm-DNA-binding domain interactions in AraC.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Strengthened arm-dimerization domain interactions in AraC.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

Transcription activation parameters at ara pBAD.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1574-6976.2010.00226.X

10.1111/J.1574-6976.2010.00226.X

21 January 2018

Identifiers

DOI

1 reference

31 July 2017

1 reference

PubMed ID

20491933