Multi-tiered genomic analysis of head and neck cancer ties TP53 mutation to 3p loss (Q34098286)

31 July 2017

Multi-tiered genomic analysis of head and neck cancer ties TP53 mutation to 3p loss (English)

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31 July 2017

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head and neck carcinoma

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Ryan K Orosco

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Ezra E Cohen

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Ezra E Cohen

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Jennifer Rubin Grandis

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Jennifer R Grandis

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31 July 2017

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Trey Ideker

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Matan Hofree

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31 July 2017

Quyen T. Nguyen, MD/PhD

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object named as

Quyen T Nguyen

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Scott M Lippman

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31 July 2017

Andrew M Gross

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John P Shen

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Ann Marie Egloff

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Hannah Carter

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Michel Choueiri

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31 July 2017

Charles S Coffey

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31 July 2017

D Neil Hayes

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31 July 2017

language of work or name

English

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publication date

3 August 2014

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46

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9

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939-943

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describes a project that uses

31 July 2017

Jupyter notebook file

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https://scigraph.springernature.com/pub.10.1038/ng.3051

exact match

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cites work

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Discovery and saturation analysis of cancer genes across 21 tumour types

28 July 2018

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The Cancer Genome Atlas Pan-Cancer analysis project

28 July 2018

1 reference

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High intratumor genetic heterogeneity is related to worse outcome in patients with head and neck squamous cell carcinoma.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4146706

Integrative genomic characterization of oral squamous cell carcinoma identifies frequent somatic drivers

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4146706

Frequent mutation of the PI3K pathway in head and neck cancer defines predictive biomarkers

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4146706

Molecular subtypes in head and neck cancer exhibit distinct patterns of chromosomal gain and loss of canonical cancer genes.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4146706

Mutual exclusivity analysis identifies oncogenic network modules

28 July 2018

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The mutational landscape of head and neck squamous cell carcinoma

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4146706

Concurrent loss of the PTEN and RB1 tumor suppressors attenuates RAF dependence in melanomas harboring (V600E)BRAF

28 July 2018

1 reference

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GISTIC2.0 facilitates sensitive and confident localization of the targets of focal somatic copy-number alteration in human cancers

28 July 2018

1 reference

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The molecular biology of head and neck cancer

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4146706

HPV-associated head and neck cancer: a virus-related cancer epidemic

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4146706

TP53 mutations and survival in squamous-cell carcinoma of the head and neck.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4146706

Epidermal growth factor receptor copy number alterations correlate with poor clinical outcome in patients with head and neck squamous cancer

28 July 2018

1 reference

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Use of allelic loss to predict malignant risk for low-grade oral epithelial dysplasia.

28 July 2018

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The role of the E6-p53 interaction in the molecular pathogenesis of HPV.

28 July 2018

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The prognostic significance of allelic imbalance at key chromosomal loci in oral cancer

28 July 2018

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The FHIT gene, spanning the chromosome 3p14.2 fragile site and renal carcinoma-associated t(3;8) breakpoint, is abnormal in digestive tract cancers

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4146706

LOH at 3p correlates with a poor survival in oral squamous cell carcinoma

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4146706

Chromosome 11q13 amplification in head and neck squamous cell carcinoma. Association with poor prognosis

28 July 2018

1 reference

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IPython: A System for Interactive Scientific Computing

28 July 2018

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A network model of a cooperative genetic landscape in brain tumors

21 January 2018

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Sensitive detection of somatic point mutations in impure and heterogeneous cancer samples

21 January 2018

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The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

21 January 2018

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21 January 2018

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Predictors of competing mortality in advanced head and neck cancer

21 January 2018

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Survival analysis of head and neck squamous cell carcinoma: influence of smoking and drinking

21 January 2018

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PubMed

https://pubmed.ncbi.nlm.nih.gov/25086664

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Molecular classification of head and neck squamous cell carcinomas using patterns of gene expression

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25086664

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NG.3051

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Dimensions Publication ID

31 July 2017

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31 July 2017

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