Tissue-specific silencing of a transgene in rice (Q34076278)

30 July 2017

title

Tissue-specific silencing of a transgene in rice (English)

1 reference

30 July 2017

Klöti A

1

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30 July 2017

He X

2

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30 July 2017

Potrykus I

3

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30 July 2017

Hohn T

4

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30 July 2017

Fütterer J

5

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30 July 2017

language of work or name

English

0 references

publication date

19 July 2002

1 reference

Proceedings of the National Academy of Sciences of the United States of America

30 July 2017

published in

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30 July 2017

volume

99

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30 July 2017

issue

16

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30 July 2017

page(s)

10881-10886

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Epigenetic codes for heterochromatin formation and silencing: rounding up the usual suspects

30 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

Cooperation between complexes that regulate chromatin structure and transcription

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

Control of CpNpG DNA methylation by the KRYPTONITE histone H3 methyltransferase

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

Application of gene silencing in plants

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

Transvection effects involving DNA methylation during meiosis in the mouse

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

Contribution of downstream promoter elements to transcriptional regulation of the rice tungro bacilliform virus promoter

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

DNA methylation patterns and epigenetic memory

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

A histone H3 methyltransferase controls DNA methylation in Neurospora crassa

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

Chromatin remodeling in plants

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

Molecular mechanisms mediating methylation-dependent silencing of ribosomal gene transcription

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

Methylation of the Opaque2 box in zein genes is parent-dependent and affects O2 DNA binding activity in vitro

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

CmC(A/T)GG DNA methylation in mature B cell lymphoma gene silencing

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

DNA methylation and epigenetic inheritance in plants and filamentous fungi

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

The role of DNA methylation in mammalian epigenetics

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

Maize chromomethylase Zea methyltransferase2 is required for CpNpG methylation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

Arabidopsis cmt3 chromomethylase mutations block non-CG methylation and silencing of an endogenous gene

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

The p120 catenin partner Kaiso is a DNA methylation-dependent transcriptional repressor

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

Two Arabidopsis methylation-deficiency mutations confer only partial effects on a methylated endogenous gene family

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

A test for transvection in plants: DNA pairing may lead to trans-activation or silencing of complex heteroalleles in tobacco

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

Regulation of activator/dissociation transposition by replication and DNA methylation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

Size constraints for targeting post-transcriptional gene silencing and for RNA-directed methylation in Nicotiana benthamiana using a potato virus X vector

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

Gene silencing and DNA methylation processes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

Replicating satellite RNA induces sequence-specific DNA methylation and truncated transcripts in plants

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

Blocking histone deacetylation in Arabidopsis induces pleiotropic effects on plant gene regulation and development

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

Transgene integration into the same chromosome location can produce alleles that express at a predictable level, or alleles that are differentially silenced

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

Transcriptional silencing and promoter methylation triggered by double-stranded RNA

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

Transcriptional transgene silencing and chromatin components

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

RNA-directed DNA methylation.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

CTCF mediates methylation-sensitive enhancer-blocking activity at the H19/Igf2 locus

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

Methylation of a CTCF-dependent boundary controls imprinted expression of the Igf2 gene

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

CpG methylation as a mechanism for the regulation of E2F activity

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

Transcriptional activation of the rice tungro bacilliform virus gene is critically dependent on an activator element located immediately upstream of the TATA box.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

A species of small antisense RNA in posttranscriptional gene silencing in plants

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

An epigenetic mutation responsible for natural variation in floral symmetry

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

Gene silencing: Maintaining methylation patterns

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

Cytosine methylation transforms an E2F site in the retinoblastoma gene promoter into a binding site for the general repressor methylcytosine-binding protein 2 (MeCP2).

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

Transvection and other homology effects

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

Maintenance of genomic methylation requires a SWI2/SNF2-like protein

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

Gene silencing: repeats that count

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

Condensation of chromatin in transcriptional regions of an inactivated plant transgene: evidence for an active role of transcription in gene silencing.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

Rice tungro bacilliform virus open reading frames II and III are translated from polycistronic pregenomic RNA by leaky scanning.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

Sp1 binding is inhibited by (m)Cp(m)CpG methylation.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

Epigenetic silencing of RNA polymerase I transcription: a role for DNA methylation and histone modification in nucleolar dominance

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

Paramutation and related allelic interactions

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

Efficient transcription from the rice tungro bacilliform virus promoter requires elements downstream of the transcription start site

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

Differential sensitivity of zinc finger transcription factors MTF-1, Sp1 and Krox-20 to CpG methylation of their binding sites.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

RIGS (repeat-induced gene silencing) in Arabidopsis is transcriptional and alters chromatin configuration

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

CpG methylation directly inhibits binding of the human papillomavirus type 16 E2 protein to specific DNA sequences.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

Splicing in a plant pararetrovirus

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

The regulatory regions of the rice tungro bacilliform virus promoter and interacting nuclear factors in rice (Oryza sativa L.)

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

Inactive chromatin spreads from a focus of methylation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

Gene silencing in transgenic plants: a heuristic autoregulation model.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

The putative transposase of transposable element Ac from Zea mays L. interacts with subterminal sequences of Ac.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

CpG methylation of the cAMP-responsive enhancer/promoter sequence TGACGTCA abolishes specific factor binding as well as transcriptional activation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

Methylation-sensitive sequence-specific DNA binding by the c-Myc basic region

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

Estradiol down regulates the binding activity of an avian vitellogenin gene repressor (MDBP-2) and triggers a gradual demethylation of the mCpG pair of its DNA binding site

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

CpG methylation inhibits binding of several sequence-specific DNA-binding proteins from pea, wheat, soybean and cauliflower

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=125067

A DNA target of 30 bp is sufficient for RNA-directed DNA methylation.

5 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.152330299

Site specificity of the Arabidopsis METI DNA methyltransferase demonstrated through hypermethylation of the superman locus

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.152330299

Disruption of the plant gene MOM releases transcriptional silencing of methylated genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.152330299

Upstream and downstream sequence elements determine the specificity of the rice tungro bacilliform virus promoter and influence RNA production after transcription initiation

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.152330299

A Revised Medium for Rapid Growth and Bio Assays with Tobacco Tissue Cultures

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.152330299

Sequence-specific and methylation-dependent and -independent binding of rice nuclear proteins to a rice tungro bacilliform virus vascular bundle expression element

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.152330299

Requirement of CHROMOMETHYLASE3 for maintenance of CpXpG methylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.152330299

Dependence of transcriptional repression on CpG methylation density

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.152330299

RNA: guiding gene silencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.152330299

Interchromosomal Transfer of Epigenetic States in Ascobolus: Transfer of DNA Methylation Is Mechanistically Related to Homologous Recombination

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.152330299

An inverted repeat triggers cytosine methylation of identical sequences in Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.152330299

A bisulfite method of 5-methylcytosine mapping that minimizes template degradation

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.152330299

Promoter elements required for phloem-specific gene expression from the RTBV promoter in rice

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.152330299

CpG methylation and the binding of YY1 and ETS proteins to the Surf-1/Surf-2 bidirectional promoter

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.152330299

Technical advance: the DNA-binding activity of gal4 is inhibited by methylation of the gal4 binding site in plant chromatin

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.152330299

A methylation-responsive MDBP/RFX site is in the first exon of the collagen alpha2(I) promoter

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.152330299

Silenced chromatin is permissive to activator binding and PIC recruitment

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.152330299

Differential inactivation and methylation of a transgene in plants by two suppressor loci containing homologous sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.152330299

Cytosine methylation and nucleolar dominance in cereal hybrids

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.152330299

The methylation patterns of chromosomal integration regions influence gene activity of transferred DNA in Petunia hybrida

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12134059

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.152330299

1 reference

30 July 2017

0 references

1 reference

30 July 2017

1 reference