Direct CRISPR spacer acquisition from RNA by a natural reverse transcriptase-Cas1 fusion protein (Q34046286)

30 July 2017

Direct CRISPR spacer acquisition from RNA by a natural reverse transcriptase-Cas1 fusion protein (English)

1 reference

30 July 2017

0 references

8

Andrew Z Fire

1 reference

30 July 2017

Sukrit Silas

1

1 reference

30 July 2017

Georg Mohr

2

1 reference

30 July 2017

David J Sidote

3

1 reference

30 July 2017

Laura M Markham

4

1 reference

30 July 2017

Antonio Sanchez-Amat

5

1 reference

30 July 2017

Devaki Bhaya

6

1 reference

30 July 2017

Alan M Lambowitz

7

1 reference

30 July 2017

language of work or name

English

0 references

publication date

1 February 2016

1 reference

30 July 2017

1 reference

30 July 2017

351

1 reference

30 July 2017

6276

1 reference

30 July 2017

aad4234

1 reference

An updated evolutionary classification of CRISPR-Cas systems

30 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

Co-transcriptional DNA and RNA Cleavage during Type III CRISPR-Cas Immunity

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

CRISPR adaptation biases explain preference for acquisition of foreign DNA

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

Cas9 specifies functional viral targets during CRISPR-Cas adaptation.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

Integrase-mediated spacer acquisition during CRISPR-Cas adaptive immunity

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

Cas9 function and host genome sampling in Type II-A CRISPR-Cas adaptation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

Programmable RNA shredding by the type III-A CRISPR-Cas system of Streptococcus thermophilus.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

Comprehensive phylogenetic analysis of bacterial reverse transcriptases.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

Conditional tolerance of temperate phages via transcription-dependent CRISPR-Cas targeting

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

Viroids: survivors from the RNA world?

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

Unravelling the structural and mechanistic basis of CRISPR-Cas systems

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

Crystal structure of Cas1 from Archaeoglobus fulgidus and characterization of its nucleolytic activity

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

Thermostable group II intron reverse transcriptase fusion proteins and their use in cDNA synthesis and next-generation RNA sequencing

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

How deep is deep enough for RNA-Seq profiling of bacterial transcriptomes?

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

Molecular memory of prior infections activates the CRISPR/Cas adaptive bacterial immunity system

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

Proteins and DNA elements essential for the CRISPR adaptation process in Escherichia coli

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

Essential features and rational design of CRISPR RNAs that function with the Cas RAMP module complex to cleave RNAs.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

Evolution and classification of the CRISPR-Cas systems

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

Mechanisms used for genomic proliferation by thermophilic group II introns

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

CRISPR interference: RNA-directed adaptive immunity in bacteria and archaea

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

RNA-guided RNA cleavage by a CRISPR RNA-Cas protein complex

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

CRISPR interference limits horizontal gene transfer in staphylococci by targeting DNA

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

A diversity of uncharacterized reverse transcriptases in bacteria

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

Small CRISPR RNAs guide antiviral defense in prokaryotes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

CRISPR Provides Acquired Resistance Against Viruses in Prokaryotes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

The tmRNA system for translational surveillance and ribosome rescue.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

Clustered regularly interspaced short palindrome repeats (CRISPRs) have spacers of extrachromosomal origin

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

Intervening sequences of regularly spaced prokaryotic repeats derive from foreign genetic elements

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

CRISPR elements in Yersinia pestis acquire new repeats by preferential uptake of bacteriophage DNA, and provide additional tools for evolutionary studies.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

Domain structure and three-dimensional model of a group II intron-encoded reverse transcriptase

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

5 July 2018

Mobile group II introns

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

Marinomonas mediterranea MMB-1 transposon mutagenesis: isolation of a multipotent polyphenol oxidase mutant

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

Studies on the phylogenetic relationships of melanogenic marine bacteria: proposal of Marinomonas mediterranea sp. nov.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

The age and evolution of non-LTR retrotransposable elements

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

An RNA that Multiplies Indefinitely with DNA-Dependent RNA Polymerase: Selection from a Random Copolymer

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

Viral RNA-dependent DNA Polymerase: RNA-dependent DNA Polymerase in Virions of Rous Sarcoma Virus

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

RNA-dependent DNA polymerase in virions of RNA tumour viruses

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

Identification of a specific telomere terminal transferase activity in Tetrahymena extracts

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

Genetic delineation of functional components of the group I intron in the phage T4 td gene

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

Origin and evolution of retroelements based upon their reverse transcriptase sequences

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

RNA Replication: Function and Structure of QBeta-Replicase

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4898656

An archaeal CRISPR type III-B system exhibiting distinctive RNA targeting features and mediating dual RNA and DNA interference.

5 July 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4234

Reverse transcriptase-mediated tropism switching in Bordetella bacteriophage

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4234

Systematic survey for novel types of prokaryotic retroelements based on gene neighborhood and protein architecture.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4234

NERD: a DNA processing-related domain present in the anthrax virulence plasmid, pXO1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1126%2FSCIENCE.AAD4234

Replication of RNA by the DNA-dependent RNA polymerase of phage T7

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26917774

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Group II intron mobility occurs by target DNA-primed reverse transcription

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26917774

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Ty elements transpose through an RNA intermediate

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26917774

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1126/SCIENCE.AAD4234

1 reference

30 July 2017

1 reference

30 July 2017

1 reference