NusA-stimulated RNA polymerase pausing and termination participates in the Bacillus subtilis trp operon attenuation mechanism invitro (Q34036802)

30 July 2017

NusA-stimulated RNA polymerase pausing and termination participates in the Bacillus subtilis trp operon attenuation mechanism invitro (English)

1 reference

30 July 2017

Bacillus subtilis

1 reference

Alexander V Yakhnin

1

1 reference

PubMed ID

12161562

30 July 2017

Paul Babitzke

series ordinal

2

1 reference

PubMed ID

12161562

30 July 2017

language of work or name

English

0 references

publication date

2 August 2002

1 reference

Proceedings of the National Academy of Sciences of the United States of America

30 July 2017

1 reference

30 July 2017

99

1 reference

30 July 2017

11067-11072

1 reference

30 July 2017

17

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PubMed ID

12161562

describes a project that uses

30 July 2017

ImageQuant

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC123211/fullTextXML

inferred from PubMed Central ID database lookup

cites work

The anti-trp RNA-binding attenuation protein (Anti-TRAP), AT, recognizes the tryptophan-activated RNA binding domain of the TRAP regulatory protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123211

Expression of the Bacillus subtilis trpEDCFBA operon is influenced by translational coupling and Rho termination factor.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123211

Posttranscription initiation control of tryptophan metabolism in Bacillus subtilis by the trp RNA-binding attenuation protein (TRAP), anti-TRAP, and RNA structure

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123211

Inhibition of the B. subtilis regulatory protein TRAP by the TRAP-inhibitory protein, AT

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123211

Allosteric control of RNA polymerase by a site that contacts nascent RNA hairpins

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123211

RNA polymerases from Bacillus subtilis and Escherichia coli differ in recognition of regulatory signals in vitro

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123211

Pausing by bacterial RNA polymerase is mediated by mechanistically distinct classes of signals

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123211

trp RNA-binding attenuation protein-5' stem-loop RNA interaction is required for proper transcription attenuation control of the Bacillus subtilis trpEDCFBA operon

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123211

A 5' RNA stem-loop participates in the transcription attenuation mechanism that controls expression of the Bacillus subtilis trpEDCFBA operon

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123211

Folding of a large ribozyme during transcription and the effect of the elongation factor NusA.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123211

Information processing by RNA polymerase: recognition of regulatory signals during RNA chain elongation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123211

MtrB from Bacillus subtilis binds specifically to trp leader RNA in a tryptophan-dependent manner

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123211

Reduced Rho-dependent transcription termination permits NusA-independent growth of Escherichia coli.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123211

Reconstitution of Bacillus subtilis trp attenuation in vitro with TRAP, the trp RNA-binding attenuation protein

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123211

trp RNA-binding attenuation protein (TRAP)-trp leader RNA interactions mediate translational as well as transcriptional regulation of the Bacillus subtilis trp operon.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123211

TRAP, the trp RNA-binding attenuation protein of Bacillus subtilis, is a multisubunit complex that appears to recognize G/UAG repeats in the trpEDCFBA and trpG transcripts.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123211

NusA changes the conformation of Escherichia coli RNA polymerase at the binding site for the 3' end of the nascent RNA

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123211

cis-acting sites in the transcript of the Bacillus subtilis trp operon regulate expression of the operon

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123211

Parameters affecting transcription termination by Escherichia coli RNA polymerase. I. Analysis of 13 rho-independent terminators

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123211

trp RNA-binding attenuation protein-mediated long distance RNA refolding regulates translation of trpE in Bacillus subtilis.

5 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.162373299

nusA protein of Escherichia coli is an efficient transcription termination factor for certain terminator sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.162373299

An elongation control particle containing the N gene transcriptional antitermination protein of bacteriophage lambda.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.162373299

Autogenous regulation of transcription termination factor Rho and the requirement for Nus factors in Bacillus subtilis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.162373299

Effects of mutations in the L-tryptophan binding pocket of the Trp RNA-binding attenuation protein of Bacillus subtilis

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12161562

12 December 2020

inferred from PubMed ID database lookup

Nus A protein affects transcriptional pausing and termination in vitro by binding to different sites on the transcription complex

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12161562

12 December 2020

inferred from PubMed ID database lookup

Determination of intrinsic transcription termination efficiency by RNA polymerase elongation rate

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12161562

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1073/PNAS.162373299

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/r3b365l2zbd3rn45fjiduadgza

30 July 2022

release_r3b365l2zbd3rn45fjiduadgza

ADS bibcode

2002PNAS...9911067Y

0 references

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/r3b365l2zbd3rn45fjiduadgza

30 July 2022

https://api.fatcat.wiki/v0/release/r3b365l2zbd3rn45fjiduadgza

1 reference

30 July 2022

https://api.fatcat.wiki/v0/release/r3b365l2zbd3rn45fjiduadgza

1 reference

30 July 2022