On the culture-independent assessment of the diversity and distribution of Prochlorococcus (Q34034932)

30 July 2017

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title

On the culture-independent assessment of the diversity and distribution of Prochlorococcus (English)

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30 July 2017

Martin Mühling

1

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30 July 2017

30 September 2011

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Environmental Microbiology

30 July 2017

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30 July 2017

14

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30 July 2017

567-579

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30 July 2017

3

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Measurement of Prochlorococcus ecotypes using real-time polymerase chain reaction reveals different abundances of genotypes with similar light physiologies

30 July 2017

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Mesoscale iron enrichment experiments 1993-2005: synthesis and future directions

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Modeling selective pressures on phytoplankton in the global ocean

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

A novel free-living prochlorophyte abundant in the oceanic euphotic zone

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Code and context: Prochlorococcus as a model for cross-scale biology

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Ecosystem-specific selection pressures revealed through comparative population genomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Genomic islands and the ecology and evolution of Prochlorococcus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

IWoCS: analyzing ribosomal intergenic transcribed spacers configuration and taxonomic relationships.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Fluid dynamical niches of phytoplankton types

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

A phylogenomic approach to bacterial phylogeny: evidence of a core of genes sharing a common history

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Genome sequence of the cyanobacterium Prochlorococcus marinus SS120, a nearly minimal oxyphototrophic genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

MUSCLE: multiple sequence alignment with high accuracy and high throughput

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Emergent biogeography of microbial communities in a model ocean

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Microbial community gene expression in ocean surface waters

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Metagenome of the Mediterranean deep chlorophyll maximum studied by direct and fosmid library 454 pyrosequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

The taxonomic and functional diversity of microbes at a temperate coastal site: a 'multi-omic' study of seasonal and diel temporal variation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Sequences, sequence clusters and bacterial species

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Dendroscope: An interactive viewer for large phylogenetic trees

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Biogeography of the ubiquitous marine bacterium Alteromonas macleodii determined by multilocus sequence analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Application of a novel rpoC1-RFLP approach reveals that marine Prochlorococcus populations in the Atlantic gyres are composed of greater microdiversity than previously described

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Detailed analysis of the microdiversity of Prochlorococcus populations along a north-south Atlantic ocean transect.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Significant CO2 fixation by small prymnesiophytes in the subtropical and tropical northeast Atlantic Ocean.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Niche partitioning among Prochlorococcus ecotypes along ocean-scale environmental gradients.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Culturing marine bacteria - an essential prerequisite for biodiscovery

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Patterns and implications of gene gain and loss in the evolution of Prochlorococcus

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Novel lineages of Prochlorococcus thrive within the oxygen minimum zone of the eastern tropical South Pacific.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

OrthoMCL: Identification of Ortholog Groups for Eukaryotic Genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Transfer of photosynthesis genes to and from Prochlorococcus viruses

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

ARB: a software environment for sequence data

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Gene order phylogeny of the genus Prochlorococcus

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Multilocus sequence typing: a portable approach to the identification of clones within populations of pathogenic microorganisms

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Temporal dynamics of Prochlorococcus ecotypes in the Atlantic and Pacific oceans

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Marine ecosystems: bacterial photosynthesis genes in a virus

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Phosphate acquisition genes in Prochlorococcus ecotypes: evidence for genome-wide adaptation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Taxonomic resolution, ecotypes and the biogeography of Prochlorococcus

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Widespread metabolic potential for nitrite and nitrate assimilation among Prochlorococcus ecotypes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Occurrence of phosphate acquisition genes in Prochlorococcus cells from different ocean regions

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Genetic diversity of marine Synechococcus and co-occurring cyanophage communities: evidence for viral control of phytoplankton.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

T-Coffee: A novel method for fast and accurate multiple sequence alignment

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

APE: Analyses of Phylogenetics and Evolution in R language

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Prochlorococcus: advantages and limits of minimalism

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Vertical structure of picophytoplankton at different trophic sites of the tropical northeastern Atlantic Ocean

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Diversity of Synechococcus and Prochlorococcus populations determined from DNA sequences of the N-regulatory gene ntcA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

FastTree 2--approximately maximum-likelihood trees for large alignments

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Modelling the vertical distribution of Prochlorococcus and Synechococcus in the North Pacific Subtropical Ocean

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Resolution of Prochlorococcus and Synechococcus ecotypes by using 16S-23S ribosomal DNA internal transcribed spacer sequences.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Whole genome amplification and de novo assembly of single bacterial cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Genome-scale approaches to resolving incongruence in molecular phylogenies

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Characterization of Prochlorococcus clades from iron-depleted oceanic regions

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Ecological genomics of marine picocyanobacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Genome evolution in cyanobacteria: the stable core and the variable shell

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Microbial diversity in the deep sea and the underexplored "rare biosphere"

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Analysis of natural populations of Prochlorococcus spp. in the northern Red Sea using phycoerythrin gene sequences.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Matching phylogeny and metabolism in the uncultured marine bacteria, one cell at a time

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Cyanophages infecting the oceanic cyanobacterium Prochlorococcus

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Bias in assessments of marine microbial biodiversity in fosmid libraries as evaluated by pyrosequencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Rapid diversification of marine picophytoplankton with dissimilar light-harvesting structures inferred from sequences of Prochlorococcus and Synechococcus (Cyanobacteria).

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

A novel clade of Prochlorococcus found in high nutrient low chlorophyll waters in the South and Equatorial Pacific Ocean.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Phylogenetic analyses of cyanobacterial genomes: quantification of horizontal gene transfer events

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Intertwined evolutionary histories of marine Synechococcus and Prochlorococcus marinus

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Prochlorococcus ecotype abundances in the North Atlantic Ocean as revealed by an improved quantitative PCR method

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Basin-scale distribution patterns of picocyanobacterial lineages in the Atlantic Ocean

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Niche adaptation in ocean cyanobacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Oceanographic Basis of the Global Surface Distribution of Prochlorococcus Ecotypes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

High resolution genetic diversity studies of marine Synechococcus isolates using rpoC1-based restriction fragment length polymorphism

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Attempting Consistent Simulations of Stn. ALOHA with a Multi-Element Ecosystem Model

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

Physiology and molecular phylogeny of coexisting Prochlorococcus ecotypes

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1462-2920.2011.02589.X

10.1111/J.1462-2920.2011.02589.X

21 January 2018

Identifiers

DOI

1 reference

30 July 2017

1 reference

PubMed ID

21957972