Detection of copy number variations in rice using array-based comparative genomic hybridization (Q33965586)

30 July 2017

Detection of copy number variations in rice using array-based comparative genomic hybridization (English)

1 reference

30 July 2017

Ping Yu

1

1 reference

30 July 2017

Caihong Wang

2

1 reference

30 July 2017

Qun Xu

3

1 reference

30 July 2017

Yue Feng

4

1 reference

30 July 2017

Xiaoping Yuan

5

1 reference

30 July 2017

Hanyong Yu

6

1 reference

30 July 2017

Yiping Wang

7

1 reference

30 July 2017

Shengxiang Tang

8

1 reference

30 July 2017

Xinghua Wei

9

1 reference

30 July 2017

language of work or name

English

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publication date

20 July 2011

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30 July 2017

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30 July 2017

12

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30 July 2017

372

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https://scigraph.springernature.com/pub.10.1186/1471-2164-12-372

30 July 2017

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cites work

Mapping copy number variation by population-scale genome sequencing

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Diversity of human copy number variation and multicopy genes

5 July 2018

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Copy number variation in the bovine genome

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

Analysis of copy number variations among diverse cattle breeds.

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

Maize inbreds exhibit high levels of copy number variation (CNV) and presence/absence variation (PAV) in genome content

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

Origins and functional impact of copy number variation in the human genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

The origins and impact of primate segmental duplications

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

Personalized copy number and segmental duplication maps using next-generation sequencing.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

Copy number variation in human health, disease, and evolution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

Detection of genomic deletions in rice using oligonucleotide microarrays

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

Copy number variants, diseases and gene expression

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

CNV-seq, a new method to detect copy number variation using high-throughput sequencing

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

High-resolution mapping of copy-number alterations with massively parallel sequencing

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

Mapping DNA structural variation in dogs

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

Integrated detection and population-genetic analysis of SNPs and copy number variation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

Copy number variation and evolution in humans and chimpanzees

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

A genome-wide meta-analysis of rice blast resistance genes and quantitative trait loci provides new insights into partial and complete resistance

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

Mouse segmental duplication and copy number variation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

Regulatory change in YABBY-like transcription factor led to evolution of extreme fruit size during tomato domestication

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

Identification of somatically acquired rearrangements in cancer using genome-wide massively parallel paired-end sequencing

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

Mapping translocation breakpoints by next-generation sequencing

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

Identification and characterization of nucleotide-binding site-leucine-rich repeat genes in the model plant Medicago truncatula

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

Paired-end mapping reveals extensive structural variation in the human genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

Challenges and standards in integrating surveys of structural variation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

Using expression arrays for copy number detection: an example from E. coli

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

Single feature polymorphism discovery in rice

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

Relative impact of nucleotide and copy number variation on gene expression phenotypes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

A high-resolution map of segmental DNA copy number variation in the mouse genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

Global variation in copy number in the human genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

Plant NBS-LRR proteins: adaptable guards

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

Copy number polymorphism in Fcgr3 predisposes to glomerulonephritis in rats and humans

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

Structural variation in the human genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

Analysis of chromosome breakpoints in neuroblastoma at sub-kilobase resolution using fine-tiling oligonucleotide array CGH.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

Segmental duplications and copy-number variation in the human genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

Identification and characterization of regions of the rice genome associated with broad-spectrum, quantitative disease resistance

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

The influence of CCL3L1 gene-containing segmental duplications on HIV-1/AIDS susceptibility

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

Circular binary segmentation for the analysis of array-based DNA copy number data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

An SNP resource for rice genetics and breeding based on subspecies indica and japonica genome alignments

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

Detection of large-scale variation in the human genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

Rapid recent growth and divergence of rice nuclear genomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

Genome-wide amplifications caused by chromosomal rearrangements play a major role in the adaptive evolution of natural yeast.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

Resistance gene complexes: evolution and utilization

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156786

Complex patterns of copy number variation at sites of segmental duplications: an important category of structural variation in the human genome.

5 July 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-372

Distribution and functional impact of DNA copy number variation in the rat.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-372

Natural selection shapes genome-wide patterns of copy-number polymorphism in Drosophila melanogaster.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-372

Allelic genome structural variations in maize detected by array comparative genome hybridization

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-372

Single-nucleotide mutation rate increases close to insertions/deletions in eukaryotes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-372

QTL clusters reflect character associations in wild and cultivated rice.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-372

Genomic paleontology provides evidence for two distinct origins of Asian rice (Oryza sativa L.).

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-372

Analysis of copy number variation in the rhesus macaque genome identifies candidate loci for evolutionary and human disease studies

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-372

Phylogenetic relationships among A-genome species of the genus Oryza revealed by intron sequences of four nuclear genes

21 January 2018

1 reference

12 December 2020

Identification of SNPs in the waxy gene among glutinous rice cultivars and their evolutionary significance during the domestication process of rice

1 reference

12 December 2020

THE BAR "GENE" A DUPLICATION

1 reference

12 December 2020

Development of genome-wide DNA polymorphism database for map-based cloning of rice genes

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2164-12-372

1 reference

Dimensions Publication ID

30 July 2017

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-12-372

9 September 2019

1 reference

30 July 2017

1 reference