Histone variant innovation in a rapidly evolving chordate lineage (Q33960896)

30 July 2017

Histone variant innovation in a rapidly evolving chordate lineage (English)

1 reference

30 July 2017

1 reference

Alexandra Moosmann

1

1 reference

30 July 2017

Coen Campsteijn

2

1 reference

30 July 2017

Pascal Wtc Jansen

3

1 reference

30 July 2017

Carole Nasrallah

4

1 reference

30 July 2017

Martina Raasholm

5

1 reference

30 July 2017

Henk G Stunnenberg

6

1 reference

30 July 2017

Eric M Thompson

7

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30 July 2017

15 July 2011

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30 July 2017

BMC Evolutionary Biology

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30 July 2017

11

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30 July 2017

208

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https://scigraph.springernature.com/pub.10.1186/1471-2148-11-208

30 July 2017

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cites work

Genes for embryo development are packaged in blocks of multivalent chromatin in zebrafish sperm

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Plasticity of animal genome architecture unmasked by rapid evolution of a pelagic tunicate

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Systematic protein location mapping reveals five principal chromatin types in Drosophila cells

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

The Amphimedon queenslandica genome and the evolution of animal complexity

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Structural basis of instability of the nucleosome containing a testis-specific histone variant, human H3T

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Single-base resolution mapping of H1-nucleosome interactions and 3D organization of the nucleosome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Mapping of lysine methylation and acetylation in core histones of Neurospora crassa

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Functional specialization of cellulose synthase genes of prokaryotic origin in chordate larvaceans

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Histone variants--ancient wrap artists of the epigenome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Birth-and-death long-term evolution promotes histone H2B variant diversification in the male germinal cell line.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Histone methylation in higher plants

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

From meiosis to postmeiotic events: the secrets of histone disappearance.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Structure and function of histone H2AX.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Characterization of the histone H2A.Z-1 and H2A.Z-2 isoforms in vertebrates

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

MRE11-RAD50-NBS1 complex dictates DNA repair independent of H2AX.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

I-TASSER: fully automated protein structure prediction in CASP8

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Culture optimization for the emergent zooplanktonic model organism Oikopleura dioica

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Four histone variants mark the boundaries of polycistronic transcription units in Trypanosoma brucei

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Mass spectrometry analysis of dynamic post-translational modifications of TH2B during spermatogenesis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Phylogenomics of unusual histone H2A Variants in Bdelloid rotifers

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

The evolutionary differentiation of two histone H2A.Z variants in chordates (H2A.Z-1 and H2A.Z-2) is mediated by a stepwise mutation process that affects three amino acid residues

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Histone H1 and its isoforms: contribution to chromatin structure and function

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

The effect of H3K79 dimethylation and H4K20 trimethylation on nucleosome and chromatin structure

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Histone lysine methyltransferases and demethylases in Plasmodium falciparum

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

DOT1L/KMT4 recruitment and H3K79 methylation are ubiquitously coupled with gene transcription in mammalian cells

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

H2A.Z: view from the top.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Regulation of DNA double-strand break repair pathway choice

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Distinctive core histone post-translational modification patterns in Arabidopsis thaliana

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

The first bromodomain of Brdt, a testis-specific member of the BET sub-family of double-bromodomain-containing proteins, is essential for male germ cell differentiation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Lysine propionylation and butyrylation are novel post-translational modifications in histones

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Pericentric heterochromatin reprogramming by new histone variants during mouse spermiogenesis.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Organismal differences in post-translational modifications in histones H3 and H4.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

The sea urchin histone gene complement

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Histone H3 variants and their potential role in indexing mammalian genomes: the "H3 barcode hypothesis"

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

The NH2 tail of the novel histone variant H2BFWT exhibits properties distinct from conventional H2B with respect to the assembly of mitotic chromosomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

The replacement histone H2A.Z in a hyperacetylated form is a feature of active genes in the chicken

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Histone H4 post-translational modifications in chordate mitotic and endoreduplicative cell cycles.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Serine 31 phosphorylation of histone variant H3.3 is specific to regions bordering centromeres in metaphase chromosomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Plasticity of histone modifications across the invertebrate to vertebrate transition: histone H3 lysine 4 trimethylation in heterochromatin

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Characterization of nucleosomes consisting of the human testis/sperm-specific histone H2B variant (hTSH2B).

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

The role of histones in chromatin remodelling during mammalian spermiogenesis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Histones and histone modifications

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Histone mRNAs do not accumulate during S phase of either mitotic or endoreduplicative cycles in the chordate Oikopleura dioica

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

The C-terminal domain is the primary determinant of histone H1 binding to chromatin in vivo

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Chromatin remodeling by ATP-dependent molecular machines.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Phylogenomics of the nucleosome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

H2AX is required for chromatin remodeling and inactivation of sex chromosomes in male mouse meiosis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Lysine-79 of histone H3 is hypomethylated at silenced loci in yeast and mammalian cells: a potential mechanism for position-effect variegation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

The human and mouse replication-dependent histone genes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Histone H3 variants specify modes of chromatin assembly

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Histone H2A variants H2AX and H2AZ

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

A new mathematical model for relative quantification in real-time RT-PCR

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Diversity of prokaryotic chromosomal proteins and the origin of the nucleosome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

SET domain proteins modulate chromatin domains in eu- and heterochromatin.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Crystal structure of the nucleosome core particle at 2.8 A resolution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Essential and nonessential histone H2A variants in Tetrahymena thermophila

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Phylogenetic analysis of the core histones H2A, H2B, H3, and H4

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Molecular characterization of the histone gene family of Caenorhabditis elegans

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

The organisation and expression of histone genes from Xenopus borealis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Protein-DNA interactions within the rat histone H4t promoter

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Sister chromatids are preferred over homologs as substrates for recombinational repair in Saccharomyces cerevisiae

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

The Organization of the Histone Genes in Drosophila melanogaster: Functional and Evolutionary Implications

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3156773

Genome-scale profiling of histone H3.3 replacement patterns.

5 July 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-208

Regions of variant histone His2AvD required for Drosophila development.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-208

Unique residues on the H2A.Z containing nucleosome surface are important for Xenopus laevis development

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-208

Patterning through differential endoreduplication in epithelial organogenesis of the chordate, Oikopleura dioica

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-208

Histone gene complement, variant expression, and mRNA processing in a urochordate Oikopleura dioica that undergoes extensive polyploidization

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-208

Phosphorylation of the histone H3.3 variant in mitosis and meiosis of the urochordate Oikopleura dioica.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-208

Histone H1 genes and histone gene clusters in the genus Drosophila

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-208

Organization of the chicken histone genes in a major gene cluster and generation of an almost complete set of the core histone protein sequences.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-208

Global histone analysis by mass spectrometry reveals a high content of acetylated lysine residues in the malaria parasite Plasmodium falciparum

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-208

Histone H2A.Z acetylation modulates an essential charge patch

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-208

Conserved patterns of nuclear compartmentalization are not observed in the chordate Oikopleura.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-208

A core nucleosome surface crucial for transcriptional silencing.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-208

Trypsin cleaves exclusively C-terminal to arginine and lysine residues

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-11-208

Histone H2AZ dimerizes with a novel variant H2B and is enriched at repetitive DNA in Trypanosoma brucei

21 January 2018

1 reference

12 December 2020

Expansion of cyclin D and CDK1 paralogs in Oikopleura dioica, a chordate employing diverse cell cycle variants

1 reference

12 December 2020

Regulated hyperacetylation of core histones during mouse spermatogenesis: involvement of histone deacetylases

1 reference

12 December 2020

The Sea Urchin Sperm Histone H2B Readily Forms a Complex with Heterologous H2A Despite Having an Elongated N-Terminal Domain

1 reference

12 December 2020

Immunohistochemical demonstration of histone H1(0) in human breast carcinoma

1 reference

12 December 2020

Tetrahymena histone H4. Complete amino acid sequences of two variants

1 reference

12 December 2020

Intra- and Inter-nucleosomal Protein-DNA Interactions of the Core Histone Tail Domains in a Model System

1 reference

12 December 2020

Structure and function of the core histone N-termini: more than meets the eye

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2148-11-208

1 reference

Dimensions Publication ID

30 July 2017

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2148-11-208

9 September 2019

1 reference

30 July 2017

1 reference