Single-mRNA counting using fluorescent in situ hybridization in budding yeast (Q33957080)

30 July 2017

Single-mRNA counting using fluorescent in situ hybridization in budding yeast (English)

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30 July 2017

7

Robert H Singer

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30 July 2017

Tatjana Trcek

1

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30 July 2017

Jeffrey A Chao

2

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30 July 2017

Daniel R Larson

3

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30 July 2017

Hye Yoon Park

4

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30 July 2017

Daniel Zenklusen

5

1 reference

30 July 2017

Shailesh M Shenoy

6

1 reference

30 July 2017

2 February 2012

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30 July 2017

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30 July 2017

7

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2

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30 July 2017

408-419

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describes a project that uses

30 July 2017

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC4112553/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

exact match

https://scigraph.springernature.com/pub.10.1038/nprot.2011.451

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cites work

Single-molecule mRNA decay measurements reveal promoter- regulated mRNA stability in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4112553

Single-molecule transcript counting of stem-cell markers in the mouse intestine

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4112553

Real-time observation of transcription initiation and elongation on an endogenous yeast gene

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4112553

Analyzing mRNA expression using single mRNA resolution fluorescent in situ hybridization

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4112553

Single mRNA tracking in live cells

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4112553

Imaging intracellular RNA distribution and dynamics in living cells

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4112553

Single-RNA counting reveals alternative modes of gene expression in yeast

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4112553

FISH glossary: an overview of the fluorescence in situ hybridization technique

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4112553

Imaging individual mRNA molecules using multiple singly labeled probes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4112553

Simultaneous transport of different localized mRNA species revealed by live-cell imaging

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4112553

Structural basis for the coevolution of a viral RNA–protein complex

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4112553

LambdaN-GFP: an RNA reporter system for live-cell imaging

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4112553

Mitochondria-associated yeast mRNAs and the biogenesis of molecular complexes.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4112553

Fluorescence in situ hybridization: past, present and future

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4112553

Precise nanometer localization analysis for individual fluorescent probes

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4112553

She2p is a novel RNA-binding protein that recruits the Myo4p-She3p complex to ASH1 mRNA.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4112553

The myosin motor, Myo4p, binds Ash1 mRNA via the adapter protein, She3p

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4112553

Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4112553

Localization of ASH1 mRNA particles in living yeast

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4112553

Visualization of single RNA transcripts in situ

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4112553

Mating type switching in yeast controlled by asymmetric localization of ASH1 mRNA.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4112553

Isoform-specific 3'-untranslated sequences sort alpha-cardiac and beta-cytoplasmic actin messenger RNAs to different cytoplasmic compartments

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4112553

Actin gene expression visualized in chicken muscle tissue culture by using in situ hybridization with a biotinated nucleotide analog

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4112553

Formation and detection of RNA-DNA hybrid molecules in cytological preparations

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4112553

Quantitative analysis of in situ hybridization methods for the detection of actin gene expression

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4112553

Transcription of functionally related constitutive genes is not coordinated.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4112553

Detection of individual endogenous RNA transcripts in situ using multiple singly labeled probes

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4112553

Metabolic cycling in single yeast cells from unsynchronized steady-state populations limited on glucose or phosphate

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4112553

Visualization of retrovirus budding with correlated light and electron microscopy.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4112553

Intracellular localization of messenger RNAs for cytoskeletal proteins

29 October 2018

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2011.451

Single-cell gene expression profiling

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2011.451

Visualization of single molecules of mRNA in situ

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2011.451

Imaging Single mRNA Molecules in Yeast

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNPROT.2011.451

31 March 2020

Identifiers

DOI

10.1038/NPROT.2011.451

1 reference

Dimensions Publication ID

30 July 2017

0 references

1 reference

30 July 2017

1 reference