Statoviruses, A novel taxon of RNA viruses present in the gastrointestinal tracts of diverse mammals (Q33914867)

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9 April 2020

title

Statoviruses, A novel taxon of RNA viruses present in the gastrointestinal tracts of diverse mammals (English)

1 reference

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Siddharth R Krishnamurthy

9 April 2020

author

2

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9 April 2020

Efrem S. Lim

3

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9 April 2020

Mark Manary

8

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9 April 2020

Lori R. Holtz

9

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9 April 2020

6

Dan H Barouch

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9 April 2020

5

Jason M Brenchley

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9 April 2020

7

Chrissie Thakwalakwa

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9 April 2020

author name string

Andrew B Janowski

1

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9 April 2020

Guoyan Zhao

4

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9 April 2020

David Wang

10

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9 April 2020

language of work or name

English

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publication date

30 January 2017

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9 April 2020

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9 April 2020

volume

504

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9 April 2020

page(s)

36-44

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Redefining the invertebrate RNA virosphere

9 April 2020

cites work

1 reference

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Hyperexpansion of RNA Bacteriophage Diversity

5 July 2018

1 reference

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MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

5 July 2018

1 reference

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SIV Infection-Mediated Changes in Gastrointestinal Bacterial Microbiome and Virome Are Associated with Immunodeficiency and Prevented by Vaccination

5 July 2018

1 reference

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Altered Virome and Bacterial Microbiome in Human Immunodeficiency Virus-Associated Acquired Immunodeficiency Syndrome

5 July 2018

1 reference

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The Pfam protein families database: towards a more sustainable future

5 July 2018

1 reference

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Divergent Viruses Discovered in Arthropods and Vertebrates Revise the Evolutionary History of the Flaviviridae and Related Viruses

5 July 2018

1 reference

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Response of Mammalian Macrophages to Challenge with the Chlorovirus Acanthocystis turfacea Chlorella Virus 1.

5 July 2018

1 reference

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Early life dynamics of the human gut virome and bacterial microbiome in infants.

5 July 2018

1 reference

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Gut DNA viromes of Malawian twins discordant for severe acute malnutrition

5 July 2018

1 reference

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Protective efficacy of adenovirus/protein vaccines against SIV challenges in rhesus monkeys

5 July 2018

1 reference

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The Phyre2 web portal for protein modeling, prediction and analysis

5 July 2018

1 reference

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Can plant viruses cross the kingdom border and be pathogenic to humans?

5 July 2018

1 reference

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Plant virus replication and movement

5 July 2018

1 reference

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Metatranscriptomic analyses of plant cell wall polysaccharide degradation by microorganisms in the cow rumen

5 July 2018

1 reference

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Unraveling the web of viroinformatics: computational tools and databases in virus research

5 July 2018

1 reference

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CDD: NCBI's conserved domain database

5 July 2018

1 reference

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Chlorovirus ATCV-1 is part of the human oropharyngeal virome and is associated with changes in cognitive functions in humans and mice

5 July 2018

1 reference

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Use of the lactulose to mannitol ratio to evaluate childhood environmental enteric dysfunction: a systematic review

5 July 2018

1 reference

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Detection of viral pathogens in high grade gliomas from unmapped next-generation sequencing data.

5 July 2018

1 reference

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The virome in mammalian physiology and disease

5 July 2018

1 reference

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Temporal response of the human virome to immunosuppression and antiviral therapy

5 July 2018

1 reference

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Identification of novel viruses using VirusHunter--an automated data analysis pipeline

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5515247

AIDS alters the commensal plasma virome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5515247

Gut microbiomes of Malawian twin pairs discordant for kwashiorkor

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5515247

Probiotic/prebiotic supplementation of antiretrovirals improves gastrointestinal immunity in SIV-infected macaques.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5515247

Pathogenic simian immunodeficiency virus infection is associated with expansion of the enteric virome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5515247

jModelTest 2: more models, new heuristics and parallel computing

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5515247

Domain enhanced lookup time accelerated BLAST.

5 July 2018

1 reference

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IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5515247

Bayesian phylogenetics with BEAUti and the BEAST 1.7

5 July 2018

1 reference

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Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5515247

Raw sewage harbors diverse viral populations

5 July 2018

1 reference

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The fecal viral flora of wild rodents

5 July 2018

1 reference

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HMMER web server: interactive sequence similarity searching

5 July 2018

1 reference

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ProtTest 3: fast selection of best-fit models of protein evolution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5515247

Natural and experimental infection of Caenorhabditis nematodes by novel viruses related to nodaviruses

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5515247

Viruses in the faecal microbiota of monozygotic twins and their mothers

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5515247

Bat guano virome: predominance of dietary viruses from insects and plants plus novel mammalian viruses

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5515247

Pepper mild mottle virus, a plant virus associated with specific immune responses, Fever, abdominal pains, and pruritus in humans

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5515247

Euprosterna elaeasa virus genome sequence and evolution of the Tetraviridae family: emergence of bipartite genomes and conservation of the VPg signal with the dsRNA Birnaviridae family

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5515247

trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5515247

Plant viral movement proteins: agents for cell-to-cell trafficking of viral genomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5515247

RNA viral community in human feces: prevalence of plant pathogenic viruses

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5515247

MUSCLE: multiple sequence alignment with high accuracy and high throughput

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5515247

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

5 July 2018

1 reference

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A structural and primary sequence comparison of the viral RNA-dependent RNA polymerases

5 July 2018

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Rapid evolution of RNA genomes

5 July 2018

1 reference

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The phylogeny of RNA-dependent RNA polymerases of positive-strand RNA viruses

5 July 2018

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10.1016/J.VIROL.2017.01.010

5 July 2018

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28152382%20AND%20SRC:MED&resulttype=core&format=json

9 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28152382%20AND%20SRC:MED&resulttype=core&format=json

9 April 2020

PubMed publication ID

28152382

1 reference