Structure, function, and evolution of transient and obligate protein-protein interactions (Q33911483)

30 July 2017

Structure, function, and evolution of transient and obligate protein-protein interactions (English)

1 reference

protein-protein interaction

30 July 2017

0 references

0 references

1 reference

Julian Mintseris

1

1 reference

PubMed ID

16043700

30 July 2017

Zhiping Weng

series ordinal

2

1 reference

PubMed ID

16043700

30 July 2017

language of work or name

English

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publication date

25 July 2005

1 reference

Proceedings of the National Academy of Sciences of the United States of America

30 July 2017

1 reference

30 July 2017

102

1 reference

30 July 2017

10930-10935

1 reference

30 July 2017

31

1 reference

The Universal Protein Resource (UniProt)

30 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1182425

MUSCLE: multiple sequence alignment with high accuracy and high throughput

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1182425

MIPS: analysis and annotation of proteins from whole genomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1182425

Apparent dependence of protein evolutionary rate on number of interactions is linked to biases in protein-protein interactions data sets

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1182425

Dosage sensitivity and the evolution of gene families in yeast

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1182425

A simple dependence between protein evolution rate and the number of protein-protein interactions

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1182425

No simple dependence between protein evolution rate and the number of protein-protein interactions: only the most prolific interactors tend to evolve slowly

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1182425

Information-theoretic dissection of pairwise contact potentials.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1182425

Evolutionary rate in the protein interaction network

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1182425

The many faces of Ras: recognition of small GTP-binding proteins

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1182425

Identification of protein oligomerization states by analysis of interface conservation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1182425

Co-evolution of proteins with their interaction partners

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1182425

Gene ontology: tool for the unification of biology

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1182425

5 July 2018

The Protein Data Bank

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1182425

Protein folding via binding and vice versa.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1182425

The HSSP database of protein structure-sequence alignments and family profiles

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1182425

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1182425

Principles of protein-protein interactions

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1182425

The subunit interfaces of oligomeric enzymes are conserved to a similar extent to the overall protein sequences

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1182425

SCOP: a structural classification of proteins database for the investigation of sequences and structures

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1182425

Amino acid substitution matrices from protein blocks

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1182425

Gaining confidence in high-throughput protein interaction networks

5 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0502667102

Shared components of protein complexes--versatile building blocks or biochemical artefacts?

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0502667102

Structural characterisation and functional significance of transient protein-protein interactions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0502667102

The constraints protein-protein interactions place on sequence divergence.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0502667102

Are protein-protein interfaces more conserved in sequence than the rest of the protein surface?

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0502667102

A highly sensitive selection method for directed evolution of homing endonucleases

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0502667102

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0502667102

Co-evolutionary analysis reveals insights into protein-protein interactions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0502667102

Large-scale co-evolution analysis of protein structural interlogues using the global protein structural interactome map (PSIMAP).

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0502667102

Estimation of the number of amino acid substitutions per site when the substitution rate varies among sites.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1182425

Protein-protein interfaces: analysis of amino acid conservation in homodimers.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1182425

Atomic contact vectors in protein‐protein recognition

29 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16043700

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.0502667102

1 reference

30 July 2017

0 references

1 reference

30 July 2017

1 reference

PubMed ID

16043700