Automated reconstruction of neuronal morphology based on local geometrical and global structural models (Q33891031)

29 July 2017

Automated reconstruction of neuronal morphology based on local geometrical and global structural models (English)

1 reference

29 July 2017

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8

Eugene Myers

1 reference

29 July 2017

1

Ting Zhao

1 reference

29 July 2017

2

Jun Xie

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29 July 2017

3

Fernando Amat

1 reference

29 July 2017

4

Nathan Clack

1 reference

29 July 2017

5

Parvez Ahammad

1 reference

29 July 2017

6

Hanchuan Peng

1 reference

29 July 2017

7

Fuhui Long

1 reference

29 July 2017

1 September 2011

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29 July 2017

15

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published in

Neuroinformatics

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29 July 2017

9

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29 July 2017

2-3

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29 July 2017

247-261

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https://scigraph.springernature.com/pub.10.1007/s12021-011-9120-3

29 July 2017

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cites work

The DIADEM data sets: representative light microscopy images of neuronal morphology to advance automation of digital reconstructions

1 reference

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Neuron tracing in perspective

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3104133

Automatic reconstruction of 3D neuron structures using a graph-augmented deformable model

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3104133

V3D enables real-time 3D visualization and quantitative analysis of large-scale biological image data sets

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3104133

MDL constrained 3-D grayscale skeletonization algorithm for automated extraction of dendrites and spines from fluorescence confocal images

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3104133

Three-dimensional neuron tracing by voxel scooping

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3104133

Detection of the optimal neuron traces in confocal microscopy images

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3104133

Bioimage informatics: a new area of engineering biology

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3104133

Rayburst sampling, an algorithm for automated three-dimensional shape analysis from laser scanning microscopy images

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3104133

Comprehensive maps of Drosophila higher olfactory centers: spatially segregated fruit and pheromone representation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3104133

Automated neurite extraction using dynamic programming for high-throughput screening of neuron-based assays.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3104133

NeuronMetrics: software for semi-automated processing of cultured neuron images

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3104133

Progress in functional neuroanatomy: precise automatic geometric reconstruction of neuronal morphology from confocal image stacks

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3104133

Three-dimensional multi-scale line filter for segmentation and visualization of curvilinear structures in medical images

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3104133

Automatic selection of parameters for vessel/neurite segmentation algorithms.

5 July 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12021-011-9120-3

Rapid automated three-dimensional tracing of neurons from confocal image stacks

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12021-011-9120-3

Coincidence detection of convergent perforant path and mossy fibre inputs by CA3 interneurons.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12021-011-9120-3

Cell type-specific structural plasticity of axonal branches and boutons in the adult neocortex.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12021-011-9120-3

Automatic segmentation and skeletonization of neurons from confocal microscopy images based on the 3-D wavelet transform.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12021-011-9120-3

New methods for the computer-assisted 3-D reconstruction of neurons from confocal image stacks.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12021-011-9120-3

New techniques for imaging, digitization and analysis of three-dimensional neural morphology on multiple scales.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12021-011-9120-3

Automated algorithms for multiscale morphometry of neuronal dendrites

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS12021-011-9120-3

Improved detection of branching points in algorithms for automated neuron tracing from 3D confocal images.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3104133

Morphology of single olivocerebellar axons labeled with biotinylated dextran amine in the rat.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3104133

Automatic neuron tracing in volumetric microscopy images with anisotropic path searching

29 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21547564

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Design and validation of a tool for neurite tracing and analysis in fluorescence microscopy images

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21547564

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1007/S12021-011-9120-3

1 reference

journals/ni/ZhaoXACAPLM11

29 July 2017

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

29 July 2017

1 reference

PubMed ID

21547564