Copy number control of IncIalpha plasmid ColIb-P9 by competition between pseudoknot formation and antisense RNA binding at a specific RNA site (Q33889444)

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English	Copy number control of IncIalpha plasmid ColIb-P9 by competition between pseudoknot formation and antisense RNA binding at a specific RNA site	scientific article

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scholarly article

1 reference

Europe PubMed Central

29 July 2017

Copy number control of IncIalpha plasmid ColIb-P9 by competition between pseudoknot formation and antisense RNA binding at a specific RNA site (English)

1 reference

Europe PubMed Central

29 July 2017

author name string

Asano K

1

1 reference

Europe PubMed Central

29 July 2017

Mizobuchi K

2

1 reference

Europe PubMed Central

29 July 2017

language of work or name

0 references

publication date

1 September 1998

1 reference

Europe PubMed Central

29 July 2017

The EMBO Journal

1 reference

Europe PubMed Central

29 July 2017

17

1 reference

Europe PubMed Central

29 July 2017

5201-5213

1 reference

Europe PubMed Central

29 July 2017

17

1 reference

Europe PubMed Central

29 July 2017

An RNA pseudoknot as the molecular switch for translation of the repZ gene encoding the replication initiator of IncIalpha plasmid ColIb-P9.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170848

5 July 2018

A small, stable RNA induced by oxidative stress: role as a pleiotropic regulator and antimutator.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170848

5 July 2018

Antisense RNA control in bacteria, phages, and plasmids

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170848

5 July 2018

Mutations affecting pseudoknot control of the replication of B group plasmids

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170848

5 July 2018

Analysis of gene control signals by DNA fusion and cloning in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170848

5 July 2018

Control of cole 1 plasmid replication: The process of binding of RNA I to the primer transcript

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170848

5 July 2018

Regulation of plasmid replication

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170848

5 July 2018

In vitro gene fusions that join an enzymatically active beta-galactosidase segment to amino-terminal fragments of exogenous proteins: Escherichia coli plasmid vectors for the detection and cloning of translational initiation signals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170848

5 July 2018

Existence of the colicinogenic factor-sex factor coli-P9 as a supercoiled circular DNA-protein relaxation complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170848

5 July 2018

Rapid and efficient site-specific mutagenesis without phenotypic selection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170848

5 July 2018

Single-stranded DNA 'blue' T7 promoter plasmids: a versatile tandem promoter system for cloning and protein engineering.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170848

5 July 2018

Plasmid incompatibility.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170848

5 July 2018

Production of single-stranded plasmid DNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170848

5 July 2018

Negative control of plasmid R6K replication: possible role of intermolecular coupling of replication origins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170848

5 July 2018

pT181 plasmid replication is regulated by a countertranscript-driven transcriptional attenuator

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170848

5 July 2018

Copy-number of broad host-range plasmid R1162 is regulated by a small RNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170848

5 July 2018

Effect of the bacterial growth rate on replication control of plasmid pBR322 in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170848

5 July 2018

Control of plasmid replication--how do DNA iterons set the replication frequency?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170848

5 July 2018

Secondary structure of the ribosome binding site determines translational efficiency: a quantitative analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170848

5 July 2018

Iteron inhibition of plasmid RK2 replication in vitro: evidence for intermolecular coupling of replication origins as a mechanism for RK2 replication control

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170848

5 July 2018

Antiparallel plasmid-plasmid pairing may control P1 plasmid replication

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170848

5 July 2018

The c4 repressors of bacteriophages P1 and P7 are antisense RNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170848

5 July 2018

Posttranscriptional control of plasmid ColIb-P9 repZ gene expression by a small RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170848

5 July 2018

Organization of the replication control region of plasmid ColIb-P9

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170848

5 July 2018

Structural and functional features of cis-acting sequences in the basic replicon of plasmid ColIb-P9

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170848

5 July 2018

Expression of the repA1 gene of IncFII plasmid NR1 is translationally coupled to expression of an overlapping leader peptide

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170848

5 July 2018

Replication control of plasmid R1: RepA synthesis is regulated by CopA RNA through inhibition of leader peptide translation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170848

5 July 2018

pi turn is a conformational pattern in RNA loops and bends

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170848

5 July 2018

Construction and characterization of amplifiable multicopy DNA cloning vehicles derived from the P15A cryptic miniplasmid

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170848

5 July 2018

A transcription terminator signal necessary for plasmid ColIb-P9 replication.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170848

29 October 2018

Sequence diversity among related genes for recognition of specific targets in DNA molecules

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1170848

29 October 2018

Structural basis for binding of the plasmid ColIb-P9 antisense Inc RNA to its target RNA with the 5'-rUUGGCG-3' motif in the loop sequence

1 reference

https://pubmed.ncbi.nlm.nih.gov/9724656

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Different base/base mismatches are corrected with different efficiencies by the methyl-directed DNA mismatch-repair system of E. coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/9724656

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Control of ColE1 plasmid replication: initial interaction of RNA I and the primer transcript is reversible

1 reference

https://pubmed.ncbi.nlm.nih.gov/9724656

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Role of leader peptide synthesis in repZ gene expression of the ColIb-P9 plasmid

1 reference

https://pubmed.ncbi.nlm.nih.gov/9724656

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Positive and negative regulations of plasmid CoLIb-P9 repZ gene expression at the translational level

1 reference

https://pubmed.ncbi.nlm.nih.gov/9724656

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

1 reference

https://pubmed.ncbi.nlm.nih.gov/9724656

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evolution of the replication regions of IncI alpha and IncFII plasmids by exchanging their replication control systems

1 reference

https://pubmed.ncbi.nlm.nih.gov/9724656

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Replication control of plasmid pLS1: the antisense RNA II and the compact rnaII region are involved in translational regulation of the initiator RepB synthesis

1 reference

https://pubmed.ncbi.nlm.nih.gov/9724656

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/EMBOJ/17.17.5201

1 reference

Europe PubMed Central

29 July 2017

1 reference

Europe PubMed Central

29 July 2017

1 reference

Europe PubMed Central

29 July 2017

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