Novel molecular markers of Chlamydia pecorum genetic diversity in the koala (Phascolarctos cinereus). (Q33874545)

29 July 2017

Novel molecular markers of Chlamydia pecorum genetic diversity in the koala (Phascolarctos cinereus). (English)

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29 July 2017

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Chlamydia pecorum

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3

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29 July 2017

James Marsh

1

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Adam Polkinghorne

object named as

Adam Polkinghorne

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4

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author name string

Avinash Kollipara

series ordinal

2

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29 July 2017

18 April 2011

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29 July 2017

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29 July 2017

11

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29 July 2017

77

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https://scigraph.springernature.com/pub.10.1186/1471-2180-11-77

29 July 2017

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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Identification and characterisation of coding tandem repeat variants in incA gene of Chlamydophila pecorum

5 July 2018

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Multi locus sequence typing of Chlamydiales: clonal groupings within the obligate intracellular bacteria Chlamydia trachomatis

5 July 2018

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Chlamydia trachomatis: genome sequence analysis of lymphogranuloma venereum isolates

5 July 2018

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Comparative studies of quantitative trait and neutral marker divergence: a meta-analysis.

5 July 2018

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Analyses of six homologous proteins of Protochlamydia amoebophila UWE25 encoded by large GC-rich genes (lgr): a model of evolution and concatenation of leucine-rich repeats

5 July 2018

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Chlamydia trachomatis OmcB protein is a surface-exposed glycosaminoglycan-dependent adhesin

5 July 2018

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Chlamydial TARP is a bacterial nucleator of actin

5 July 2018

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The ompA gene in Chlamydia trachomatis differs in phylogeny and rate of evolution from other regions of the genome

5 July 2018

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Polymorphisms in the nine polymorphic membrane proteins of Chlamydia trachomatis across all serovars: evidence for serovar Da recombination and correlation with tissue tropism.

5 July 2018

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Aspects of diversity measurement for microbial communities.

5 July 2018

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Comparative Genomic Analysis of Chlamydia trachomatis Oculotropic and Genitotropic Strains

5 July 2018

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A genomic island present along the bacterial chromosome of the Parachlamydiaceae UWE25, an obligate amoebal endosymbiont, encodes a potentially functional F-like conjugative DNA transfer system

5 July 2018

1 reference

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Molecular evidence for novel chlamydial infections in the koala (Phascolarctos cinereus).

5 July 2018

1 reference

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5 July 2018

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Evaluation of methods for detecting recombination from DNA sequences: computer simulations

5 July 2018

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Sister-scanning: a Monte Carlo procedure for assessing signals in recombinant sequences

5 July 2018

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Computational analysis of the polymorphic membrane protein superfamily of Chlamydia trachomatis and Chlamydia pneumoniae

5 July 2018

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Emended description of the order Chlamydiales, proposal of Parachlamydiaceae fam. nov. and Simkaniaceae fam. nov., each containing one monotypic genus...

5 July 2018

1 reference

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Epizootiology of Chlamydia infections in two free-range koala populations.

5 July 2018

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Comparative genomes of Chlamydia pneumoniae and C. trachomatis

5 July 2018

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Characterization of the koala biovar of Chlamydia pneumoniae at four gene loci--ompAVD4, ompB, 16S rRNA, groESL spacer region

5 July 2018

1 reference

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MODELTEST: testing the model of DNA substitution

5 July 2018

1 reference

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Genome Sequence of an Obligate Intracellular Pathogen of Humans: Chlamydia trachomatis

5 July 2018

1 reference

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Type III secretion genes identify a putative virulence locus of Chlamydia

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101125

The ribosomal intergenic spacer and domain I of the 23S rRNA gene are phylogenetic markers for Chlamydia spp.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101125

Structures of and allelic diversity and relationships among the major outer membrane protein (ompA) genes of the four chlamydial species

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101125

Phylogenetic analysis of the outer-membrane-protein genes of Chlamydiae, and its implication for vaccine development

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101125

Comparison of type I and type II Chlamydia psittaci strains infecting koalas (Phascolarctos cinereus).

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101125

Comparison of the major outer-membrane protein (MOMP) gene of mouse pneumonitis (MoPn) and hamster SFPD strains of Chlamydia trachomatis with other Chlamydia strains

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101125

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101125

Keratoconjunctivitis of the koala, Phascolarctos cinereus, caused by Chlamydia psittaci

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101125

Isolation of Chlamydia psittaci from koalas (Phascolarctos cinereus).

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101125

Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101125

Two distinct forms of Chlamydia psittaci associated with disease and infertility in Phascolarctos cinereus (koala)

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101125

Chlamydial disease in koalas

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101125

Relationships between gene trees and species trees

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101125

Diversity of Chlamydia trachomatis major outer membrane protein genes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101125

Comparison of Chlamydia psittaci isolates by restriction endonuclease and DNA probe analyses

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101125

Detection of Chlamydia psittaci in free-ranging koalas (Phascolarctos cinereus): DNA hybridization and immuno-slot blot analyses

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101125

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101125

Interaction of chlamydiae and host cells in vitro

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101125

Analyzing the mosaic structure of genes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101125

DNA sequencing with chain-terminating inhibitors

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101125

International Committee on Systematics of Prokaryotes. Subcommittee on the taxonomy of the Chlamydiae: minutes of the inaugural closed meeting, 21 March 2009, Little Rock, AR, USA.

5 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1471-2180-11-77

International Committee on Systematics of Prokaryotes. Subcommittee on the taxonomy of the Chlamydiae: minutes of the closed meeting, 21 June 2010, Hof bei Salzburg, Austria

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1471-2180-11-77

Chlamydial homologues of the MACPF (MAC/perforin) domain

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1471-2180-11-77

Recombination detection and analysis using RDP3.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101125

Problems in measuring bacterial diversity and a possible solution.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3101125

Identification of breakpoints in intergenotypic recombinants of HIV type 1 by bootscanning

29 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21496349

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Possible emergence of new geminiviruses by frequent recombination

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21496349

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2180-11-77

1 reference

PubMed ID

21496349

Dimensions Publication ID

29 July 2017

0 references

0 references

1 reference

29 July 2017

1 reference

PubMed ID

21496349