ProDy: protein dynamics inferred from theory and experiments (Q33864431)

29 July 2017

ProDy: protein dynamics inferred from theory and experiments (English)

1 reference

29 July 2017

3

Ivet Bahar

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author name string

Ahmet Bakan

series ordinal

1

1 reference

PubMed ID

21471012

29 July 2017

Lidio M Meireles

series ordinal

2

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PubMed ID

21471012

29 July 2017

language of work or name

English

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publication date

5 April 2011

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29 July 2017

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29 July 2017

27

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29 July 2017

11

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29 July 2017

1575-1577

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Creative Commons Attribution-NonCommercial 2.5 Generic

29 July 2017

start time

2 October 2016

1 reference

April 2023 Public Data File from Crossref

copyright status

copyrighted

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cites work

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1 reference

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Using entropy maximization to understand the determinants of structural dynamics beyond native contact topology

5 July 2018

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On the conservation of the slow conformational dynamics within the amino acid kinase family: NAGK the paradigm

5 July 2018

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Normal mode analysis of biomolecular structures: functional mechanisms of membrane proteins

5 July 2018

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The intrinsic dynamics of enzymes plays a dominant role in determining the structural changes induced upon inhibitor binding

5 July 2018

1 reference

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Comparison of molecular dynamics and superfamily spaces of protein domain deformation.

5 July 2018

1 reference

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Principal component analysis of native ensembles of biomolecular structures (PCA_NEST): insights into functional dynamics

5 July 2018

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Close correspondence between the motions from principal component analysis of multiple HIV-1 protease structures and elastic network modes

5 July 2018

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Intrinsic dynamics of enzymes in the unbound state and relation to allosteric regulation

5 July 2018

1 reference

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ElNemo: a normal mode web server for protein movement analysis and the generation of templates for molecular replacement

5 July 2018

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PDB file parser and structure class implemented in Python

5 July 2018

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A database of macromolecular motions

5 July 2018

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VMD: visual molecular dynamics

5 July 2018

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Essential dynamics of proteins

5 July 2018

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Enlarged representative set of protein structures

5 July 2018

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5 July 2018

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Anisotropic network model: systematic evaluation and a new web interface.

21 January 2018

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Predictions of protein flexibility: first-order measures

21 January 2018

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Hinge-bending motion in citrate synthase arising from normal mode calculations.

21 January 2018

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Deciphering the deformation modes associated with function retention and specialization in members of the Ras superfamily.

21 January 2018

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Harmonicity in slow protein dynamics

21 January 2018

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10.1093/BIOINFORMATICS/BTR168

21 January 2018

Identifiers

DOI

1 reference

journals/bioinformatics/BakanMB11

29 July 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

29 July 2017

1 reference

PubMed ID

21471012