Crystal structure of DNA sequence specificity subunit of a type I restriction-modification enzyme and its functional implications (Q33858629)

29 July 2017

Crystal structure of DNA sequence specificity subunit of a type I restriction-modification enzyme and its functional implications (English)

1 reference

29 July 2017

4

1 reference

29 July 2017

7

Sung-Hou Kim

1 reference

29 July 2017

3

Jaru Jancarik

1 reference

29 July 2017

6

Rosalind Kim

1 reference

29 July 2017

5

Hisao Yokota

1 reference

29 July 2017

Jeong-Sun Kim

1

1 reference

PubMed ID

15728358

29 July 2017

Andy DeGiovanni

series ordinal

2

1 reference

PubMed ID

15728358

29 July 2017

language of work or name

English

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publication date

22 February 2005

1 reference

Proceedings of the National Academy of Sciences of the United States of America

29 July 2017

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29 July 2017

102

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29 July 2017

3248-3253

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29 July 2017

9

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KpnBI is the prototype of a new family (IE) of bacterial type I restriction-modification system

29 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549290

Crystal structure of fervidolysin from Fervidobacterium pennivorans, a keratinolytic enzyme related to subtilisin

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549290

The Rad50 zinc-hook is a structure joining Mre11 complexes in DNA recombination and repair

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549290

Structure of the N6-adenine DNA methyltransferase M.TaqI in complex with DNA and a cofactor analog

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549290

Structure of the molecular chaperone prefoldin: unique interaction of multiple coiled coil tentacles with unfolded proteins

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549290

Four-helical-bundle structure of the cytoplasmic domain of a serine chemotaxis receptor

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549290

Structure of human pro-matrix metalloproteinase-2: activation mechanism revealed

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549290

Automated MAD and MIR structure solution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549290

Localization of a protein-DNA interface by random mutagenesis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549290

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549290

Isolation of a non-classical mutant of the DNA recognition subunit of the type I restriction endonuclease R.EcoR124I.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549290

Repercussions of DNA tracking by the type IC restriction endonuclease EcoR124I on linear, circular and catenated substrates.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549290

Protein structure comparison by alignment of distance matrices

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549290

Biology of DNA restriction

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549290

A symmetrical model for the domain structure of type I DNA methyltransferases

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549290

The diversity of alleles at the hsd locus in natural populations of Escherichia coli

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549290

Structure and Mechanism of Multifunctional Restriction Endonucleases

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549290

Model for how type I restriction enzymes select cleavage sites in DNA.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549290

Basis for changes in DNA recognition by the EcoR124 and EcoR124/3 type I DNA restriction and modification enzymes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549290

Conservation of organization in the specificity polypeptides of two families of type I restriction enzymes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549290

Ligation-independent cloning of PCR products (LIC-PCR)

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549290

Improved methods for building protein models in electron density maps and the location of errors in these models

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549290

Increased protein flexibility leads to promiscuous protein-DNA interactions in type IC restriction-modification systems

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549290

Recombination of constant and variable modules alters DNA sequence recognition by type IC restriction-modification enzymes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=549290

Posttranscriptional regulation of EcoP1I and EcoP15I restriction activity

5 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0409851102

Sequence diversity among related genes for recognition of specific targets in DNA molecules

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0409851102

Processing of X-ray diffraction data collected in oscillation mode

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0409851102

PROCHECK: a program to check the stereochemical quality of protein structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0409851102

MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0409851102

The DNA restriction endonuclease of Escherichia coli B. II. Further studies of the structure of DNA intermediates and products

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15728358

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Deletions within the DNA recognition subunit of M.EcoR124I that identify a region involved in protein-protein interactions between HsdS and HsdM

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15728358

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

DNA cleavage by the type IC restriction-modification enzyme EcoR124II

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15728358

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.0409851102

1 reference

29 July 2017

0 references

1 reference

29 July 2017

1 reference

PubMed ID

15728358