Linked read sequencing resolves complex genomic rearrangements in gastric cancer metastases (Q33815218)

29 July 2017

Linked read sequencing resolves complex genomic rearrangements in gastric cancer metastases (English)

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29 July 2017

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6

James M Ford

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29 July 2017

Stephanie U Greer

1

1 reference

29 July 2017

Lincoln D Nadauld

2

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29 July 2017

Billy T Lau

3

1 reference

29 July 2017

Jiamin Chen

4

1 reference

29 July 2017

Christina Wood-Bouwens

5

1 reference

29 July 2017

Calvin J Kuo

7

1 reference

29 July 2017

Hanlee P Ji

8

1 reference

29 July 2017

19 June 2017

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29 July 2017

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29 July 2017

9

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29 July 2017

1

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29 July 2017

57

1 reference

https://scigraph.springernature.com/pub.10.1186/s13073-017-0447-8

29 July 2017

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4 July 2018

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4 July 2018

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4 July 2018

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4 July 2018

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4 July 2018

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4 July 2018

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Detection of Genomic Structural Variants from Next-Generation Sequencing Data

4 July 2018

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4 July 2018

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Metastatic tumor evolution and organoid modeling implicate TGFBR2 as a cancer driver in diffuse gastric cancer

4 July 2018

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Comprehensive molecular characterization of gastric adenocarcinoma

4 July 2018

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LUMPY: a probabilistic framework for structural variant discovery.

4 July 2018

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Oncogenic transformation of diverse gastrointestinal tissues in primary organoid culture

4 July 2018

1 reference

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ETS fusion genes in prostate cancer.

4 July 2018

1 reference

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FGFR2 amplification has prognostic significance in gastric cancer: results from a large international multicentre study

4 July 2018

1 reference

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Detection of structural DNA variation from next generation sequencing data: a review of informatic approaches

4 July 2018

1 reference

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Diverse mechanisms of somatic structural variations in human cancer genomes

4 July 2018

1 reference

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FGFR2 gene amplification in gastric cancer predicts sensitivity to the selective FGFR inhibitor AZD4547.

4 July 2018

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Phenotypic impact of genomic structural variation: insights from and for human disease

4 July 2018

1 reference

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The tumorigenic FGFR3-TACC3 gene fusion escapes miR-99a regulation in glioblastoma

4 July 2018

1 reference

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Oncogenic FGFR3 gene fusions in bladder cancer

4 July 2018

1 reference

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Evolution of the cancer genome

4 July 2018

1 reference

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Characterizing complex structural variation in germline and somatic genomes

4 July 2018

1 reference

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Copy number variation detection in whole-genome sequencing data using the Bayesian information criterion

4 July 2018

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Overexpression of a chromatin remodeling factor, RSF-1/HBXAP, correlates with aggressive oral squamous cell carcinoma

4 July 2018

1 reference

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Massive genomic rearrangement acquired in a single catastrophic event during cancer development

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5477353

Rsf-1, a chromatin remodeling protein, induces DNA damage and promotes genomic instability.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5477353

Monoclonal antibodies to fibroblast growth factor receptor 2 effectively inhibit growth of gastric tumor xenografts

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5477353

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

4 July 2018

1 reference

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Genomic instability--an evolving hallmark of cancer

4 July 2018

1 reference

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BEDTools: a flexible suite of utilities for comparing genomic features

4 July 2018

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Fibroblast growth factor signalling: from development to cancer

4 July 2018

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Fast and accurate long-read alignment with Burrows-Wheeler transform

4 July 2018

1 reference

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Sustained in vitro intestinal epithelial culture within a Wnt-dependent stem cell niche

4 July 2018

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4 July 2018

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Transcriptome sequencing to detect gene fusions in cancer

4 July 2018

1 reference

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Aberrant receptor internalization and enhanced FRS2-dependent signaling contribute to the transforming activity of the fibroblast growth factor receptor 2 IIIb C3 isoform

4 July 2018

1 reference

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FGFR2-amplified gastric cancer cell lines require FGFR2 and Erbb3 signaling for growth and survival

4 July 2018

1 reference

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Identification of the transforming EML4-ALK fusion gene in non-small-cell lung cancer

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5477353

Perioperative chemotherapy versus surgery alone for resectable gastroesophageal cancer

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5477353

Adjuvant therapy in gastric cancer

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5477353

Chromosome studies on normal and leukemic human leukocytes

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5477353

Letter: A new consistent chromosomal abnormality in chronic myelogenous leukaemia identified by quinacrine fluorescence and Giemsa staining

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5477353

Detection of redundant fusion transcripts as biomarkers or disease-specific therapeutic targets in breast cancer.

4 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2FS13073-017-0447-8

Rsf-1 overexpression correlates with poor prognosis and cell proliferation in colon cancer

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28629429

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Induction of small cell lung cancer by somatic inactivation of both Trp53 and Rb1 in a conditional mouse model

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28629429

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/S13073-017-0447-8

1 reference

Dimensions Publication ID

29 July 2017

0 references

1 reference

29 July 2017

1 reference