"Deep" sequencing accuracy and reproducibility using Roche/454 technology for inferring co-receptor usage in HIV-1. (Q33800017)

24959876

29 July 2017

title

"Deep" sequencing accuracy and reproducibility using Roche/454 technology for inferring co-receptor usage in HIV-1. (English)

1 reference

29 July 2017

1 reference

1

1 reference

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9 June 2020

Art Poon

3

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9 June 2020

author name string

Rachel A McGovern

2

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9 June 2020

Xiaoyin Zhong

4

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9 June 2020

Dennison Chan

5

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9 June 2020

Luke C Swenson

6

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9 June 2020

Winnie Dong

7

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9 June 2020

P Richard Harrigan

8

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9 June 2020

language of work or name

English

0 references

publication date

24 June 2014

1 reference

29 July 2017

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9 June 2020

volume

9

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9 June 2020

issue

6

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9 June 2020

page(s)

e99508

1 reference

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Creative Commons Attribution 4.0 International

9 June 2020

copyright license

start time

24 June 2014

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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1 reference

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Opening Pandora's Box--the new biology of driver mutations and clonal evolution in cancer as revealed by next generation sequencing

4 July 2018

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Accurate sampling and deep sequencing of the HIV-1 protease gene using a Primer ID

4 July 2018

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Evaluation of genomic high-throughput sequencing data generated on Illumina HiSeq and genome analyzer systems

4 July 2018

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Tracking single hematopoietic stem cells in vivo using high-throughput sequencing in conjunction with viral genetic barcoding

4 July 2018

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Performance of ultra-deep pyrosequencing in analysis of HIV-1 pol gene variation

4 July 2018

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Detection of inferred CCR5- and CXCR4-using HIV-1 variants and evolutionary intermediates using ultra-deep pyrosequencing

4 July 2018

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Deep sequencing to infer HIV-1 co-receptor usage: application to three clinical trials of maraviroc in treatment-experienced patients

4 July 2018

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Methods for analyzing deep sequencing expression data: constructing the human and mouse promoterome with deepCAGE data

4 July 2018

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A double-blind, placebo-controlled trial of maraviroc in treatment-experienced patients infected with non-R5 HIV-1.

4 July 2018

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Detection of low-frequency pretherapy chemokine (CXC motif) receptor 4 (CXCR4)-using HIV-1 with ultra-deep pyrosequencing.

4 July 2018

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Maraviroc for previously treated patients with R5 HIV-1 infection

4 July 2018

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Subclonal phylogenetic structures in cancer revealed by ultra-deep sequencing

4 July 2018

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RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays

4 July 2018

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4 July 2018

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Maraviroc (UK-427,857), a potent, orally bioavailable, and selective small-molecule inhibitor of chemokine receptor CCR5 with broad-spectrum anti-human immunodeficiency virus type 1 activity

4 July 2018

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Genome sequencing in microfabricated high-density picolitre reactors

4 July 2018

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Improved coreceptor usage prediction and genotypic monitoring of R5-to-X4 transition by motif analysis of human immunodeficiency virus type 1 env V3 loop sequences

4 July 2018

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A new classification for HIV-1

4 July 2018

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Comparative clonal analysis of reconstitution kinetics after transplantation of hematopoietic stem cells gene marked with a lentiviral SIN or a γ-retroviral LTR vector

4 July 2018

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Improved detection of CXCR4-using HIV by V3 genotyping: application of population-based and "deep" sequencing to plasma RNA and proviral DNA.

21 January 2018

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The Interlaboratory RObustness of Next-generation sequencing (IRON) study: a deep sequencing investigation of TET2, CBL and KRAS mutations by an international consortium involving 10 laboratories.

21 January 2018

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Deep V3 Sequencing for HIV Type 1 Tropism in Treatment-Naive Patients: A Reanalysis of the MERIT Trial of Maraviroc

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24959876

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0099508

1 reference

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9 June 2020

0 references

1 reference

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9 June 2020

24959876

1 reference

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