Changes in conformational equilibria regulate the activity of the Dcp2 decapping enzyme (Q33790825)

29 July 2017

title

Changes in conformational equilibria regulate the activity of the Dcp2 decapping enzyme (English)

1 reference

29 July 2017

Jan Philip Wurm

1

1 reference

29 July 2017

Iris Holdermann

2

1 reference

29 July 2017

Jan H Overbeck

3

1 reference

29 July 2017

Philipp H O Mayer

4

1 reference

29 July 2017

Remco Sprangers

5

1 reference

29 July 2017

language of work or name

English

0 references

publication date

22 May 2017

1 reference

Proceedings of the National Academy of Sciences of the United States of America

29 July 2017

published in

1 reference

29 July 2017

volume

114

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29 July 2017

issue

23

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29 July 2017

page(s)

6034-6039

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Structural basis of mRNA-cap recognition by Dcp1-Dcp2

29 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468633

Structure of the active form of Dcp1-Dcp2 decapping enzyme bound to m7GDP and its Edc3 activator

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468633

A general method for rapid and cost-efficient large-scale production of 5' capped RNA.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468633

The S. pombe mRNA decapping complex recruits cofactors and an Edc1-like activator through a single dynamic surface

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468633

Structure of the Dcp2-Dcp1 mRNA-decapping complex in the activated conformation

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468633

The oligomeric architecture of the archaeal exosome is important for processive and efficient RNA degradation

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468633

An excess of catalytically required motions inhibits the scavenger decapping enzyme

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468633

Methyl-specific isotopic labeling: a molecular tool box for solution NMR studies of large proteins

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468633

Integrative, dynamic structural biology at atomic resolution--it's about time

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468633

Structural Basis for Protein Antiaggregation Activity of the Trigger Factor Chaperone

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468633

The archaeal exosome: identification and quantification of site-specific motions that correlate with cap and RNA binding.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468633

Regulation of cytoplasmic mRNA decay

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468633

Interdomain dynamics and coactivation of the mRNA decapping enzyme Dcp2 are mediated by a gatekeeper tryptophan.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468633

The structural basis of Edc3- and Scd6-mediated activation of the Dcp1:Dcp2 mRNA decapping complex

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468633

Dcp1 links coactivators of mRNA decapping to Dcp2 by proline recognition

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468633

A split active site couples cap recognition by Dcp2 to activation

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468633

Dynamic regulation of archaeal proteasome gate opening as studied by TROSY NMR

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468633

Structural Basis of Dcp2 Recognition and Activation by Dcp1

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468633

The bacterial enzyme RppH triggers messenger RNA degradation by 5' pyrophosphate removal.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468633

Open-to-closed transition in apo maltose-binding protein observed by paramagnetic NMR

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468633

Initiation of RNA decay in Escherichia coli by 5' pyrophosphate removal

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468633

The Nudix hydrolase superfamily

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468633

Crystal structure and functional analysis of Dcp2p from Schizosaccharomyces pombe

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468633

Ensemble approach for NMR structure refinement against (1)H paramagnetic relaxation enhancement data arising from a flexible paramagnetic group attached to a macromolecule

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468633

Functional characterization of the mammalian mRNA decapping enzyme hDcp2

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468633

Human Dcp2: a catalytically active mRNA decapping enzyme located in specific cytoplasmic structures

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468633

The hDcp2 protein is a mammalian mRNA decapping enzyme

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468633

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468633

NMRPipe: a multidimensional spectral processing system based on UNIX pipes

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5468633

Dectin-1 is an extracellular pathogen sensor for the induction and processing of IL-1β via a noncanonical caspase-8 inflammasome

4 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1704496114

21 January 2018

mRNA decapping in 3D.

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1704496114

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1704496114

Structural characterization of proteins with an attached ATCUN motif by paramagnetic relaxation enhancement NMR spectroscopy.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1704496114

Quantitative dynamics and binding studies of the 20S proteasome by NMR

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1704496114

A single-quantum methyl 13C-relaxation dispersion experiment with improved sensitivity

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28533364

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.1704496114

1 reference

29 July 2017

1 reference

29 July 2017

1 reference