State of the art molecular markers for fecal pollution source tracking in water (Q33787006)

29 July 2017

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title

State of the art molecular markers for fecal pollution source tracking in water (English)

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29 July 2017

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Peter Roslev

1

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29 July 2017

Annette S Bukh

series ordinal

2

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29 July 2017

language of work or name

English

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publication date

6 January 2011

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Applied Microbiology and Biotechnology

29 July 2017

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29 July 2017

89

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29 July 2017

5

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29 July 2017

1341-1355

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https://scigraph.springernature.com/pub.10.1007/s00253-010-3080-7

29 July 2017

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Integrated analysis of established and novel microbial and chemical methods for microbial source tracking

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Enterococci concentrations in diverse coastal environments exhibit extreme variability

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Evaluation of F+ RNA and DNA Coliphages as Source-Specific Indicators of Fecal Contamination in Surface Waters

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Host distributions of uncultivated fecal Bacteroidales bacteria reveal genetic markers for fecal source identification

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Relative decay of Bacteroidales microbial source tracking markers and cultivated Escherichia coli in freshwater microcosms.

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Specificity and sensitivity evaluation of novel and existing Bacteroidales and Bifidobacteria-specific PCR assays on feces and sewage samples and their application for microbial source tracking in Ireland

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Fecal source tracking, the indicator paradigm, and managing water quality

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Enteric viruses of humans and animals in aquatic environments: health risks, detection, and potential water quality assessment tools.

21 January 2018

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Molecular assays for targeting human and bovine enteric viruses in coastal waters and their application for library-independent source tracking

21 January 2018

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Quantitative real-time PCR assays for sensitive detection of Canada goose-specific fecal pollution in water sources

21 January 2018

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Molecular detection of pathogens in water--the pros and cons of molecular techniques

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Geographical structure and host specificity in bacteria and the implications for tracing the source of coliform contamination

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Evaluation of two library-independent microbial source tracking methods to identify sources of fecal contamination in French estuaries

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Development of microbial and chemical MST tools to identify the origin of the faecal pollution in bathing and shellfish harvesting waters in France

21 January 2018

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Development of goose- and duck-specific DNA markers to determine sources of Escherichia coli in waterways

21 January 2018

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Escherichia coli populations in Great Lakes waterfowl exhibit spatial stability and temporal shifting

21 January 2018

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Detection of the esp gene in high-level gentamicin resistant Enterococcus faecalis strains from pet animals in Japan

21 January 2018

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Validation and field testing of library-independent microbial source tracking methods in the Gulf of Mexico

21 January 2018

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Identification of human and animal adenoviruses and polyomaviruses for determination of sources of fecal contamination in the environment

21 January 2018

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Development of a qPCR assay for the quantification of porcine adenoviruses as an MST tool for swine fecal contamination in the environment

21 January 2018

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Development of a quantitative PCR assay for the quantitation of bovine polyomavirus as a microbial source-tracking tool.

21 January 2018

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Teschoviruses as Indicators of Porcine Fecal Contamination of Surface Water

21 January 2018

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21 January 2018

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Feasibility of methods based on nucleic acid amplification techniques to fulfil the requirements for microbiological analysis of water quality.

21 January 2018

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21 January 2018

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A biomarker for the identification of swine fecal pollution in water, using the STII toxin gene from enterotoxigenic Escherichia coli

21 January 2018

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16S rRNA-based assays for quantitative detection of universal, human-, cow-, and dog-specific fecal Bacteroidales: a Bayesian approach

21 January 2018

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Characterization of Enterococcus spp. from human and animal feces using 16S rRNA sequences, the esp gene, and PFGE for microbial source tracking in Korea.

21 January 2018

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Representational difference analysis and real-time PCR for strain-specific quantification of Lactobacillus sobrius sp. nov

21 January 2018

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Universal mitochondrial PCR combined with species-specific dot-blot assay as a source-tracking method of human, bovine, chicken, ovine, and porcine in fecal-contaminated surface water.

21 January 2018

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Development of Bacteroides 16S rRNA gene TaqMan-based real-time PCR assays for estimation of total, human, and bovine fecal pollution in water

21 January 2018

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Distribution and diversity of the enterococcal surface protein (esp) gene in animal hosts and the Pacific coast environment

21 January 2018

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Evaluation of new gyrB-based real-time PCR system for the detection of B. fragilis as an indicator of human-specific fecal contamination

21 January 2018

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Molecular characterization of bacteriophages for microbial source tracking in Korea

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Bovine enteroviruses as indicators of fecal contamination

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Identification of chicken-specific fecal microbial sequences using a metagenomic approach

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Phylogenetic diversity and molecular detection of bacteria in gull feces

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Microbial diversity and host-specific sequences of Canada goose feces

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Detection of bovine and porcine adenoviruses for tracing the source of fecal contamination

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Evaluation of Lactobacillus sobrius/L. amylovorus as a new microbial marker of pig manure

21 January 2018

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Detection of human-derived fecal pollution in environmental waters by use of a PCR-based human polyomavirus assay

21 January 2018

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Quantification of human polyomaviruses JC Virus and BK Virus by TaqMan quantitative PCR and comparison to other water quality indicators in water and fecal samples

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Estimation of pig fecal contamination in a river catchment by real-time PCR using two pig-specific Bacteroidales 16S rRNA genetic markers

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Phylogenetic analysis of Bacteroidales 16S rRNA gene sequences from human and animal effluents and assessment of ruminant faecal pollution by real-time PCR.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Use of Bifidobacterium dentium as an indicator of the origin of fecal water pollution

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Multitiered approach using quantitative PCR to track sources of fecal pollution affecting Santa Monica Bay, California

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Comparison of propidium monoazide with ethidium monoazide for differentiation of live vs. dead bacteria by selective removal of DNA from dead cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Use of propidium monoazide for live/dead distinction in microbial ecology

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Persistence of host-specific Bacteroides-Prevotella 16S rRNA genetic markers in environmental waters: effects of temperature and salinity

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Quantification of host-specific Bacteroides-Prevotella 16S rRNA genetic markers for assessment of fecal pollution in freshwater

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Quantitative PCR method for sensitive detection of ruminant fecal pollution in freshwater and evaluation of this method in alpine karstic regions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

A quantitative real-time PCR assay for the highly sensitive and specific detection of human faecal influence in spring water from a large alpine catchment area

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Quantitative microbial faecal source tracking with sampling guided by hydrological catchment dynamics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Uptake and persistence of human associated Enterococcus in the mussel Mytilus edulis: relevance for faecal pollution source tracking.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Application of mussels as biosamplers for characterization of faecal pollution in coastal recreational waters.

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Quo vadis source tracking? Towards a strategic framework for environmental monitoring of fecal pollution

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Frequent occurrence of the human-specific Bacteroides fecal marker at an open coast marine beach: relationship to waves, tides and traditional indicators

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Detection and persistence of fecal Bacteroidales as water quality indicators in unchlorinated drinking water

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Real-time PCR detection and quantification of nine potential sources of fecal contamination by analysis of mitochondrial cytochrome b targets

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Comment on "Environmental occurrence of the enterococcal surface protein (esp) gene is an unreliable indicator of human fecal contamination".

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Detection and quantification of the human-specific HF183 Bacteroides 16S rRNA genetic marker with real-time PCR for assessment of human faecal pollution in freshwater.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Quantitative PCR for detection and enumeration of genetic markers of bovine fecal pollution

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Quantitative PCR for genetic markers of human fecal pollution

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Using DNA microarrays to identify library-independent markers for bacterial source tracking

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Microbiological monitoring and automated event sampling at karst springs using LEO-satellites.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Evaluating the operational utility of a Bacteroidales quantitative PCR-based MST approach in determining the source of faecal indicator organisms at a UK bathing water.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Performance, design, and analysis in microbial source tracking studies

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

A technique for the quantification of human and non-human mammalian mitochondrial DNA copy number in forensic and other mixtures.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Detection of the nifH gene of Methanobrevibacter smithii: a potential tool to identify sewage pollution in recreational waters.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Development of a swine-specific fecal pollution marker based on host differences in methanogen mcrA genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Methanobrevibacter ruminantium as an indicator of domesticated-ruminant fecal pollution in surface waters

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Survival and persistence of human and ruminant-specific faecal Bacteroidales in freshwater microcosms.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Estimating true human and animal host source contribution in quantitative microbial source tracking using the Monte Carlo method

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Escherichia coli sampling reliability at a frequently closed Chicago Beach: monitoring and management implications.

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Incidence of the enterococcal surface protein (esp) gene in human and animal fecal sources

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Viral multiplex quantitative PCR assays for tracking sources of fecal contamination

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Development of Faecalibacterium 16S rRNA gene marker for identification of human faeces

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Chemical-based fecal source tracking methods: current status and guidelines for evaluation

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

A PCR marker for detection in surface waters of faecal pollution derived from ducks

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

Application of polymerase chain reaction (PCR) and TaqMan™ PCR techniques to the detection and identification of Rhodococcus coprophilus in faecal samples

21 January 2018

1 reference

https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

The Future of Microbial Source Tracking Studies

21 January 2018

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https://api.crossref.org/works/10.1007%2FS00253-010-3080-7

10.1007/S00253-010-3080-7

21 January 2018

Identifiers

DOI

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Dimensions Publication ID

29 July 2017

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