Probing TBP interactions in transcription initiation and reinitiation with RNA aptamers that act in distinct modes. (Q33781651)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15103022%20AND%20SRC:MED&resulttype=core&format=json

27 December 2019

title

Probing TBP interactions in transcription initiation and reinitiation with RNA aptamers that act in distinct modes (English)

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27 December 2019

3

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27 December 2019

author name string

Xiaochun Fan

series ordinal

1

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27 December 2019

Hua Shi

series ordinal

2

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27 December 2019

John T Lis

series ordinal

4

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27 December 2019

language of work or name

English

0 references

publication date

21 April 2004

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Proceedings of the National Academy of Sciences of the United States of America

27 December 2019

published in

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27 December 2019

volume

101

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27 December 2019

issue

18

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27 December 2019

page(s)

6934-6939

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Reverse engineering gene networks: Integrating genetic perturbations with dynamical modeling

27 December 2019

cites work

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Evolutionary dynamics and population control during in vitro selection and amplification with multiple targets

4 July 2018

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Intramers as promising new tools in functional proteomics

4 July 2018

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Control of gene expression through regulation of the TATA-binding protein

4 July 2018

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RNA aptamers as effective protein antagonists in a multicellular organism

4 July 2018

1 reference

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Molecular genetics of the RNA polymerase II general transcriptional machinery

4 July 2018

1 reference

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Biochemistry and structural biology of transcription factor IID (TFIID)

4 July 2018

1 reference

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Protein-protein interactions in eukaryotic transcription initiation: structure of the preinitiation complex

4 July 2018

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DNA topology and a minimal set of basal factors for transcription by RNA polymerase II

4 July 2018

1 reference

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Mot1, a global repressor of RNA polymerase II transcription, inhibits TBP binding to DNA by an ATP-dependent mechanism.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=406445

Distamycin A and tallimustine inhibit TBP binding and basal in vitro transcription.

4 July 2018

1 reference

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Crystal structure of a TFIIB-TBP-TATA-element ternary complex

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=406445

Diversity of oligonucleotide functions

4 July 2018

1 reference

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Five intermediate complexes in transcription initiation by RNA polymerase II

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=406445

Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase

4 July 2018

1 reference

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Specific initiation by RNA polymerase I in a whole-cell extract from yeast

4 July 2018

1 reference

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Purification of his-tagged proteins in non-denaturing conditions suggests a convenient method for protein interaction studies

4 July 2018

1 reference

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Transcriptional activation in an improved whole-cell extract from Saccharomyces cerevisiae

4 July 2018

1 reference

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In vitro selection of RNA molecules that bind specific ligands

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=406445

Kinetic analysis of yeast TFIID-TATA box complex formation suggests a multi-step pathway

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=406445

Crystal structure of TFIID TATA-box binding protein

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=406445

Dr1, a TATA-binding protein-associated phosphoprotein and inhibitor of class II gene transcription

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=406445

The cell as a collection of protein machines: preparing the next generation of molecular biologists

4 July 2018

1 reference

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Functional steps in transcription initiation and reinitiation from the major late promoter in a HeLa nuclear extract.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=406445

A transcription reinitiation intermediate that is stabilized by activator

30 October 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0401523101

An ATP-dependent inhibitor of TBP binding to DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0401523101

TATA box mimicry by TFIID: autoinhibition of pol II transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0401523101

The stability of the TFIIA-TBP-DNA complex is dependent on the sequence of the TATAAA element

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0401523101

Binding of transcription factor TFIID to the major late promoter during in vitro nucleosome assembly potentiates subsequent initiation by RNA polymerase II

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0401523101

21 January 2018

Identifiers

DOI

10.1073/PNAS.0401523101

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15103022%20AND%20SRC:MED&resulttype=core&format=json

27 December 2019

0 references

1 reference

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27 December 2019

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