Features analysis for identification of date and party hubs in protein interaction network of Saccharomyces Cerevisiae (Q33774716)

29 July 2017

Features analysis for identification of date and party hubs in protein interaction network of Saccharomyces Cerevisiae (English)

1 reference

29 July 2017

Saccharomyces cerevisiae

1 reference

Mitra Mirzarezaee

1

1 reference

PubMed ID

21167069

29 July 2017

Babak N Araabi

series ordinal

2

1 reference

PubMed ID

21167069

29 July 2017

Mehdi Sadeghi

series ordinal

3

1 reference

29 July 2017

19 December 2010

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29 July 2017

1 reference

29 July 2017

4

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29 July 2017

172

1 reference

https://scigraph.springernature.com/pub.10.1186/1752-0509-4-172

29 July 2017

0 references

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Hub promiscuity in protein-protein interaction networks

4 July 2018

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Predicting highly-connected hubs in protein interaction networks by QSAR and biological data descriptors.

4 July 2018

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4 July 2018

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Hubs with network motifs organize modularity dynamically in the protein-protein interaction network of yeast

4 July 2018

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Support Vector Machine-based method for predicting subcellular localization of mycobacterial proteins using evolutionary information and motifs

4 July 2018

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Using pseudo amino acid composition to predict protein structural class: approached by incorporating 400 dipeptide components.

4 July 2018

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Stratus not altocumulus: a new view of the yeast protein interaction network

4 July 2018

1 reference

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What properties characterize the hub proteins of the protein-protein interaction network of Saccharomyces cerevisiae?

4 July 2018

1 reference

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Why do hubs tend to be essential in protein networks?

4 July 2018

1 reference

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Global landscape of protein complexes in the yeast Saccharomyces cerevisiae

4 July 2018

1 reference

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Evaluation of different biological data and computational classification methods for use in protein interaction prediction

4 July 2018

1 reference

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Proteome survey reveals modularity of the yeast cell machinery

4 July 2018

1 reference

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Scale-free networks in cell biology

4 July 2018

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Protein database searches using compositionally adjusted substitution matrices

4 July 2018

1 reference

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Towards a proteome-scale map of the human protein–protein interaction network

4 July 2018

1 reference

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A human protein-protein interaction network: a resource for annotating the proteome

4 July 2018

1 reference

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Some protein interaction data do not exhibit power law statistics

4 July 2018

1 reference

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LOCSVMPSI: a web server for subcellular localization of eukaryotic proteins using SVM and profile of PSI-BLAST

4 July 2018

1 reference

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Text mining for metabolic pathways, signaling cascades, and protein networks

4 July 2018

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Illuminating drug discovery with biological pathways

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3018396

Interaction network containing conserved and essential protein complexes in Escherichia coli

4 July 2018

1 reference

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Predicting protein-peptide interactions via a network-based motif sampler

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3018396

Evidence for dynamically organized modularity in the yeast protein-protein interaction network

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3018396

Extracting human protein interactions from MEDLINE using a full-sentence parser

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3018396

Prediction and Functional Analysis of Native Disorder in Proteins from the Three Kingdoms of Life

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3018396

Network biology: understanding the cell's functional organization

4 July 2018

1 reference

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A map of the interactome network of the metazoan C. elegans

4 July 2018

1 reference

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IntAct: an open source molecular interaction database

4 July 2018

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The Database of Interacting Proteins: 2004 update

4 July 2018

1 reference

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The Gene Ontology Annotation (GOA) Database: sharing knowledge in Uniprot with Gene Ontology

4 July 2018

1 reference

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A protein interaction map of Drosophila melanogaster

4 July 2018

1 reference

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A neural-network based method for prediction of gamma-turns in proteins from multiple sequence alignment.

4 July 2018

1 reference

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Prediction of beta-turns in proteins from multiple alignment using neural network

4 July 2018

1 reference

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MULTIPROSPECTOR: an algorithm for the prediction of protein-protein interactions by multimeric threading

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3018396

Interrogating protein interaction networks through structural biology

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3018396

Towards the prediction of complete protein--protein interaction networks

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3018396

Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3018396

Relating whole-genome expression data with protein-protein interactions

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3018396

Identification of potential interaction networks using sequence-based searches for conserved protein-protein interactions or "interologs".

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3018396

Correlation between transcriptome and interactome mapping data from Saccharomyces cerevisiae

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3018396

A relationship between gene expression and protein interactions on the proteome scale: analysis of the bacteriophage T7 and the yeast Saccharomyces cerevisiae

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3018396

Lethality and centrality in protein networks

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3018396

Prediction of protein cellular attributes using pseudo-amino acid composition

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3018396

A comprehensive two-hybrid analysis to explore the yeast protein interactome

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3018396

Independent component analysis: algorithms and applications

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3018396

Error and attack tolerance of complex networks

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3018396

Gene ontology: tool for the unification of biology

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3018396

A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3018396

Protein interaction maps for complete genomes based on gene fusion events

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3018396

Detecting protein function and protein-protein interactions from genome sequences

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3018396

Assigning protein functions by comparative genome analysis: Protein phylogenetic profiles

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3018396

The use of gene clusters to infer functional coupling

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3018396

Conservation of gene order: a fingerprint of proteins that physically interact

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3018396

Gaussian mixture density modeling, decomposition, and applications.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3018396

Computational prediction of protein-protein interactions.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3018396

Prediction of protein subcellular locations by support vector machines using compositions of amino acids and amino acid pairs.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3018396

Integrative approach for computationally inferring protein domain interactions.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3018396

30 October 2018

Identifiers

DOI

10.1186/1752-0509-4-172

1 reference

journals/bmcsb/MirzarezaeeAS10

29 July 2017

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

29 July 2017

1 reference

PubMed ID

21167069