Solving the protein sequence metric problem (Q33772010)

29 July 2017

Solving the protein sequence metric problem (English)

1 reference

29 July 2017

William R Atchley

1

1 reference

29 July 2017

Jieping Zhao

series ordinal

2

1 reference

29 July 2017

Andrew D Fernandes

series ordinal

3

1 reference

29 July 2017

Tanja Drüke

series ordinal

4

1 reference

29 July 2017

language of work or name

English

0 references

publication date

25 April 2005

1 reference

Proceedings of the National Academy of Sciences of the United States of America

29 July 2017

1 reference

29 July 2017

102

1 reference

29 July 2017

6395-6400

1 reference

29 July 2017

18

1 reference

Sequence signatures and the probabilistic identification of proteins in the Myc-Max-Mad network

29 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088356

Phylogenetic analysis of the human basic helix-loop-helix proteins

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088356

The basic helix-loop-helix protein family: comparative genomics and phylogenetic analysis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088356

A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088356

Separation of phylogenetic and functional associations in biological sequences by using the parametric bootstrap

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088356

Correlations among amino acid sites in bHLH protein domains: an information theoretic analysis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088356

A natural classification of the basic helix-loop-helix class of transcription factors

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088356

Covariation of residues in the homeodomain sequence family

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088356

Covariation of mutations in the V3 loop of human immunodeficiency virus type 1 envelope protein: an information theoretic analysis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088356

Amino acid difference formula to help explain protein evolution

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088356

Relations between chemical structure and biological activity in peptides

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088356

The rapid generation of mutation data matrices from protein sequences

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088356

Exhaustive matching of the entire protein sequence database

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088356

Amino acid substitution matrices from protein blocks

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088356

Conformation of amino acid side-chains in proteins

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088356

Positional dependence, cliques, and predictive motifs in the bHLH protein domain

28 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0408677102

A novel use of equilibrium frequencies in models of sequence evolution

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1088356

An analysis of non-bonded energy of proteins

30 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15851683

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.0408677102

1 reference

release_msgdmnersza5vlu66amuknaebu

29 July 2017

0 references

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/msgdmnersza5vlu66amuknaebu

mapped directly with Wikidata item

24 November 2022

based on heuristic

PMCID

1088356

1 reference

29 July 2017

1 reference