Evaluation of external RNA controls for the standardisation of gene expression biomarker measurements (Q33755464)

29 July 2017

Evaluation of external RNA controls for the standardisation of gene expression biomarker measurements (English)

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29 July 2017

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Alison S Devonshire

1

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29 July 2017

Ramnath Elaswarapu

series ordinal

2

1 reference

29 July 2017

Carole A Foy

series ordinal

3

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29 July 2017

language of work or name

English

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publication date

24 November 2010

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29 July 2017

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29 July 2017

11

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29 July 2017

662

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https://scigraph.springernature.com/pub.10.1186/1471-2164-11-662

29 July 2017

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cites work

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Consolidated strategy for the analysis of microarray spike-in data

21 June 2018

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Commercialized multigene predictors of clinical outcome for breast cancer.

21 June 2018

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Reproducible and reliable microarray results through quality control: good laboratory proficiency and appropriate data analysis practices are essential

21 June 2018

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Relative quantification of mRNA: comparison of methods currently used for real-time PCR data analysis

21 June 2018

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Detection limits of several commercial reverse transcriptase enzymes: impact on the low- and high-abundance transcript levels assessed by quantitative RT-PCR

21 June 2018

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Meta-analysis of microarray results: challenges, opportunities, and recommendations for standardization

21 June 2018

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Robust interlaboratory reproducibility of a gene expression signature measurement consistent with the needs of a new generation of diagnostic tools

21 June 2018

1 reference

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Rat toxicogenomic study reveals analytical consistency across microarray platforms

21 June 2018

1 reference

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The MicroArray Quality Control (MAQC) project shows inter- and intraplatform reproducibility of gene expression measurements

21 June 2018

1 reference

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Evaluation of external RNA controls for the assessment of microarray performance

21 June 2018

1 reference

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Validation and clinical utility of a 70-gene prognostic signature for women with node-negative breast cancer

21 June 2018

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The end of the microarray Tower of Babel: will universal standards lead the way?

21 June 2018

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Comparison of in vitro and in vivo reference genes for internal standardization of real-time PCR data

21 June 2018

1 reference

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Comparison of algorithms for the analysis of Affymetrix microarray data as evaluated by co-expression of genes in known operons

21 June 2018

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Proposed methods for testing and selecting the ERCC external RNA controls

21 June 2018

1 reference

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Real-time PCR for mRNA quantitation

21 June 2018

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Cross-platform comparability of microarray technology: intra-platform consistency and appropriate data analysis procedures are essential

21 June 2018

1 reference

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Standardizing global gene expression analysis between laboratories and across platforms.

21 June 2018

1 reference

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Real-time RT-PCR normalisation; strategies and considerations.

21 June 2018

1 reference

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A multigene assay to predict recurrence of tamoxifen-treated, node-negative breast cancer

21 June 2018

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Gene expression profiling for molecular staging and prognosis prediction in colorectal cancer.

21 June 2018

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Performance evaluation of commercial short-oligonucleotide microarrays and the impact of noise in making cross-platform correlations

21 June 2018

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Pitfalls of quantitative real-time reverse-transcription polymerase chain reaction

21 June 2018

1 reference

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Properties of the reverse transcription reaction in mRNA quantification

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091780

New real-time reverse transcriptase-initiated PCR assay with single-copy sensitivity for human immunodeficiency virus type 1 RNA in plasma

21 June 2018

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Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091780

The promise of toxicogenomics.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091780

Housekeeping genes as internal standards: use and limits

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091780

Evaluation of DNA microarray results with quantitative gene expression platforms

21 June 2018

1 reference

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The External RNA Controls Consortium: a progress report.

30 October 2018

1 reference

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Universal RNA reference materials for gene expression.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091780

Multiple-laboratory comparison of microarray platforms

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091780

The development of microarray standards

30 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21106083

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2164-11-662

1 reference

Dimensions Publication ID

29 July 2017

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-11-662

9 September 2019

1 reference

29 July 2017

1 reference