Bovine proteins containing poly-glutamine repeats are often polymorphic and enriched for components of transcriptional regulatory complexes. (Q33752268)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21092319%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

title

Bovine proteins containing poly-glutamine repeats are often polymorphic and enriched for components of transcriptional regulatory complexes (English)

1 reference

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16 January 2020

3

1 reference

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16 January 2020

David J. Lynn

4

1 reference

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16 January 2020

William Barendse

7

1 reference

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16 January 2020

Ross Tellam

9

1 reference

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16 January 2020

author name string

Vicki Whan

1

1 reference

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16 January 2020

Matthew Hobbs

2

1 reference

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16 January 2020

Ylva Strandberg Lutzow

5

1 reference

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16 January 2020

Mehar Khatkar

6

1 reference

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16 January 2020

Herman Raadsma

8

1 reference

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16 January 2020

language of work or name

English

0 references

publication date

23 November 2010

1 reference

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16 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21092319%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

volume

11

1 reference

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16 January 2020

page(s)

654

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21092319%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

16 January 2020

Cytoscape

object named as

Cytoscape

2 references

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

exact match

https://scigraph.springernature.com/pub.10.1186/1471-2164-11-654

0 references

cites work

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21 June 2018

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Bovine Muc1 is a highly polymorphic gene encoding an extensively glycosylated mucin that binds bacteria

21 June 2018

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Unlocking the bovine genome.

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Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

21 June 2018

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CAG-encoded polyglutamine length polymorphism in the human genome

21 June 2018

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Mutation patterns of amino acid tandem repeats in the human proteome

21 June 2018

1 reference

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Positive selection of a pre-expansion CAG repeat of the human SCA2 gene

21 June 2018

1 reference

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Repeat instability: mechanisms of dynamic mutations

21 June 2018

1 reference

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Coding repeats and evolutionary "agility".

21 June 2018

1 reference

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Molecular origins of rapid and continuous morphological evolution

21 June 2018

1 reference

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In vitro analysis of partial loss-of-function ZIC2 mutations in holoprosencephaly: alanine tract expansion modulates DNA binding and transactivation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014979

Evolutionary conservation and selection of human disease gene orthologs in the rat and mouse genomes

21 June 2018

1 reference

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Structural and functional consequences of glutamine tract variation in the androgen receptor.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014979

Comparative analysis of amino acid repeats in rodents and humans

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014979

Organization and function of the small Tim complexes acting along the import pathway of metabolite carriers into mammalian mitochondria

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014979

Cytoscape: a software environment for integrated models of biomolecular interaction networks

21 June 2018

1 reference

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More than the sum of their parts: on the evolution of proteins from peptides

21 June 2018

1 reference

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DAVID: Database for Annotation, Visualization, and Integrated Discovery

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014979

Two distinct domains of Bicoid mediate its transcriptional downregulation by the Torso pathway.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014979

The spinocerebellar ataxia type 1 protein, ataxin-1, has RNA-binding activity that is inversely affected by the length of its polyglutamine tract

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014979

The polyglutamine expansion in spinocerebellar ataxia type 6 causes a beta subunit-specific enhanced activation of P/Q-type calcium channels in Xenopus oocytes.

21 June 2018

1 reference

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Repeat polymorphisms within gene regions: phenotypic and evolutionary implications

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014979

The Huntington's disease protein interacts with p53 and CREB-binding protein and represses transcription

21 June 2018

1 reference

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Aberrant interactions of transcriptional repressor proteins with the Huntington's disease gene product, huntingtin

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014979

Dissection of the NF-Y transcriptional activation potential

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014979

Direct alteration of the P/Q-type Ca2+ channel property by polyglutamine expansion in spinocerebellar ataxia 6.

21 June 2018

1 reference

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Dynamic mutation: possible mechanisms and significance in human disease

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014979

Trinucleotide repeat disorders

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014979

A novel gene containing a trinucleotide repeat that is expanded and unstable on Huntington's disease chromosomes.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014979

Transcriptional activation modulated by homopolymeric glutamine and proline stretches

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014979

Trinucleotide repeat length and progression of illness in Huntington's disease

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014979

Statistical significance of sequence patterns in proteins

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014979

A transcriptional repressor obtained by alternative translation of a trinucleotide repeat

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014979

Testing heterozygote excess and deficiency

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014979

Properties of a CCAAT box-binding protein

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014979

Slippage synthesis of simple sequence DNA

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014979

Intron-exon organization of the NF-Y genes. Tissue-specific splicing modifies an activation domain

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014979

Identification of the porcine homologous of human disease causing trinucleotide repeat sequences.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014979

Identification of a gene network contributing to hypertrophy in callipyge skeletal muscle.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014979

Detection of length-dependent effects of tandem repeat alleles by 3-D geometric decomposition of craniofacial variation

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014979

Patterns of CAG repeat interruptions in SCA1 and SCA2 genes in relation to repeat instability

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014979

The polyglycine and polyglutamine repeats in the androgen receptor gene in Japanese and Caucasian populations.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014979

Dynamics of CAG repeat loci revealed by the analysis of their variability

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014979

Mismatch repair and mutational bias in microsatellite DNA.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014979

Evolution of a transcriptional repression domain in an insect Hox protein.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3014979

Are non‐functional, unfolded proteins (‘junk proteins’) common in the genome?

30 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21092319

12 December 2020

inferred from PubMed ID database lookup

Population variation analysis at nine loci containing expressed trinucleotide repeats

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21092319

12 December 2020

inferred from PubMed ID database lookup

Selection and slippage creating serine homopolymers

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21092319

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1186/1471-2164-11-654

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21092319%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

16 January 2020

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-11-654

9 September 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21092319%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

PubMed publication ID

21092319

1 reference