Evolutionary genomics revealed interkingdom distribution of Tcn1-like chromodomain-containing Gypsy LTR retrotransposons among fungi and plants (Q33551056)

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English	Evolutionary genomics revealed interkingdom distribution of Tcn1-like chromodomain-containing Gypsy LTR retrotransposons among fungi and plants	scientific article

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30 January 2020

Evolutionary genomics revealed interkingdom distribution of Tcn1-like chromodomain-containing Gypsy LTR retrotransposons among fungi and plants (English)

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retrotransposon

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Georgy Smyshlyaev

2

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30 January 2020

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Olga Novikova

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Alexander Blinov

3

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8 April 2010

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30 January 2020

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231

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30 January 2020

https://scigraph.springernature.com/pub.10.1186/1471-2164-11-231

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Phylogeny and evolution of ferns (monilophytes) with a focus on the early leptosporangiate divergences

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21 June 2018

Chromodomains and LTR retrotransposons in plants

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21 June 2018

Whole genome surveys of rice, maize and sorghum reveal multiple horizontal transfers of the LTR-retrotransposon Route66 in Poaceae.

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21 June 2018

The relative ages of ectomycorrhizal mushrooms and their plant hosts estimated using Bayesian relaxed molecular clock analyses

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21 June 2018

Non-LTR retrotransposons in fungi

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21 June 2018

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21 June 2018

Chromodomains direct integration of retrotransposons to heterochromatin.

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21 June 2018

Evidence for horizontal transfer of a secondary metabolite gene cluster between fungi

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21 June 2018

Horizontal transfer of a nitrate assimilation gene cluster and ecological transitions in fungi: a phylogenetic study

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21 June 2018

CR1 clade of non-LTR retrotransposons from Maculinea butterflies (Lepidoptera: Lycaenidae): evidence for recent horizontal transmission

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21 June 2018

A higher-level phylogenetic classification of the Fungi

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21 June 2018

MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0

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21 June 2018

Horizontal gene transfer in plants

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21 June 2018

Phylogenetic distribution and evolution of mycorrhizas in land plants

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21 June 2018

LTR retrotransposons and flowering plant genome size: emergence of the increase/decrease model

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21 June 2018

Construction of a bacterial artificial chromosome library from the spikemoss Selaginella moellendorffii: a new resource for plant comparative genomics.

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21 June 2018

Polygalacturonase from Sitophilus oryzae: possible horizontal transfer of a pectinase gene from fungi to weevils

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21 June 2018

Protein encoding genes in an ancient plant: analysis of codon usage, retained genes and splice sites in a moss, Physcomitrella patens

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21 June 2018

Massive horizontal transfer of mitochondrial genes from diverse land plant donors to the basal angiosperm Amborella

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21 June 2018

The many colours of chromodomains.

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21 June 2018

Evolutionary genomics of chromoviruses in eukaryotes

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21 June 2018

Horizontal gene transfer from flowering plants to Gnetum

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21 June 2018

The origin and evolution of model organisms

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21 June 2018

The role of retroviral dUTPases in replication and virulence

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21 June 2018

Genomic evolution of the long terminal repeat retrotransposons in hemiascomycetous yeasts

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21 June 2018

Reverse transcription of retroviruses and LTR retrotransposons

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21 June 2018

A retrotransposon-derived gene, PEG10, is a novel imprinted gene located on human chromosome 7q21

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21 June 2018

Multiple lineages of the non-LTR retrotransposon Rex1 with varying success in invading fish genomes

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21 June 2018

Long terminal repeats are used as alternative promoters for the endothelin B receptor and apolipoprotein C-I genes in humans

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21 June 2018

Ty3/Gypsy retrotransposons: description of new Arabidopsis thaliana elements and evolutionary perspectives derived from comparative genomic data

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21 June 2018

REAL, an LTR retrotransposon from the plant pathogenic fungus Alternaria alternata

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21 June 2018

Multiple LTR-retrotransposon families in the asexual yeast Candida albicans

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21 June 2018

Evidence for the recent horizontal transfer of long terminal repeat retrotransposon

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21 June 2018

Legume nodulation and mycorrhizae formation; two extremes in host specificity meet

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21 June 2018

Unusual horizontal transfer of a long interspersed nuclear element between distant vertebrate classes

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21 June 2018

Potential retroviruses in plants: Tat1 is related to a group of Arabidopsis thaliana Ty3/gypsy retrotransposons that encode envelope-like proteins

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21 June 2018

Modern thoughts on an ancyent marinere: function, evolution, regulation

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21 June 2018

Ylt1, a highly repetitive retrotransposon in the genome of the dimorphic fungus Yarrowia lipolytica

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21 June 2018

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

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21 June 2018

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21 June 2018

A novel mechanism of self-primed reverse transcription defines a new family of retroelements

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21 June 2018

The chromo superfamily: new members, duplication of the chromo domain and possible role in delivering transcription regulators to chromatin

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21 June 2018

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21 June 2018

The Polycomb protein shares a homologous domain with a heterochromatin-associated protein of Drosophila

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21 June 2018

Horizontal transfer

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21 June 2018

Novel clades of chromodomain-containing Gypsy LTR retrotransposons from mosses (Bryophyta).

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31 October 2018

Tmt1: the first LTR-retrotransposon from a Tuber spp.

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Fungi evolution revisited: application of the penalized likelihood method to a Bayesian fungal phylogeny provides a new perspective on phylogenetic relationships and divergence dates of Ascomycota groups

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31 October 2018

A functional screen identifies lateral transfer of beta-glucuronidase (gus) from bacteria to fungi.

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31 October 2018

The diversity of retrotransposons in the yeast Cryptococcus neoformans.

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31 October 2018

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31 October 2018

Gypsy-like retrotransposons in Pyrenophora: an abundant and informative class of molecular markers

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evidence of multiple horizontal transfers of the long terminal repeat retrotransposon RIRE1 within the genus Oryza

1 reference

https://pubmed.ncbi.nlm.nih.gov/20377908

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

DUTPase-containing metaviridae LTR retrotransposons from the genome of Phanerochaete chrysosporium (Fungi: Basidiomycota)

1 reference

https://pubmed.ncbi.nlm.nih.gov/20377908

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Confidence Limits on Phylogenies: an Approach using the Bootstrap

1 reference

https://pubmed.ncbi.nlm.nih.gov/20377908

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/1471-2164-11-231

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30 January 2020

Dimensions Publication ID

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https://scigraph.springernature.com/pub.10.1186/1471-2164-11-231

9 September 2019

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30 January 2020

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30 January 2020

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