BSSF: a fingerprint based ultrafast binding site similarity search and function analysis server (Q33526478)

27 July 2017

BSSF: a fingerprint based ultrafast binding site similarity search and function analysis server (English)

1 reference

27 July 2017

Bing Xiong

1

0 references

author name string

Jie Wu

2

1 reference

27 July 2017

David L Burk

3

1 reference

27 July 2017

Mengzhu Xue

4

1 reference

27 July 2017

Hualiang Jiang

5

1 reference

27 July 2017

Jingkang Shen

6

1 reference

27 July 2017

25 January 2010

1 reference

27 July 2017

1 reference

27 July 2017

11

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27 July 2017

47

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Creative Commons Attribution 2.0 Generic

27 July 2017

start time

25 January 2010

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

1 reference

April 2022 Public Data File from Crossref

exact match

https://scigraph.springernature.com/pub.10.1186/1471-2105-11-47

0 references

cites work

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Integration of relational and hierarchical network information for protein function prediction

21 June 2018

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Exploring the structure and function paradigm.

21 June 2018

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Detecting evolutionary relationships across existing fold space, using sequence order-independent profile-profile alignments.

21 June 2018

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A threading-based method (FINDSITE) for ligand-binding site prediction and functional annotation

21 June 2018

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Predicting protein function from sequence and structure

21 June 2018

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Computational protein function prediction: are we making progress?

21 June 2018

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Structural genomics: the ultimate approach for rational drug design

21 June 2018

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Evolution of protein fold in the presence of functional constraints

21 June 2018

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The RCSB PDB information portal for structural genomics

21 June 2018

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SitesBase: a database for structure-based protein-ligand binding site comparisons

21 June 2018

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Protein molecular function prediction by Bayesian phylogenomics

21 June 2018

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Understanding nature's catalytic toolkit

21 June 2018

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The HHpred interactive server for protein homology detection and structure prediction

21 June 2018

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Inference of protein function from protein structure.

21 June 2018

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Recognition of functional sites in protein structures.

21 June 2018

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WebFEATURE: An interactive web tool for identifying and visualizing functional sites on macromolecular structures

21 June 2018

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Dynamic roles of arginine residues 82 and 92 of Escherichia coli 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase: crystallographic studies

21 June 2018

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Structural genomics: bridging functional genomics and structure-based drug design

21 June 2018

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The Pfam protein families database

21 June 2018

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Gene ontology: tool for the unification of biology

21 June 2018

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21 June 2018

The Protein Data Bank

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Recognition of spatial motifs in protein structures

21 June 2018

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The new partnership of genomics and chemistry for accelerated drug development

21 June 2018

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Detection of protein three-dimensional side-chain patterns: new examples of convergent evolution.

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098077

Empirical statistical estimates for sequence similarity searches.

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098077

TESS: a geometric hashing algorithm for deriving 3D coordinate templates for searching structural databases. Application to enzyme active sites

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098077

CATH--a hierarchic classification of protein domain structures

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098077

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098077

Protein clefts in molecular recognition and function

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098077

Mapping the protein universe

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098077

SCOP: a structural classification of proteins database for the investigation of sequences and structures

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098077

The relation between the divergence of sequence and structure in proteins

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098077

Future structural genomics initiatives: an interview with Helen Berman, director of the Protein Data Bank. Interview by Wendy A Warr

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098077

Protein function prediction using local 3D templates.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098077

Inferring functional relationships of proteins from local sequence and spatial surface patterns

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098077

Efficient identification of side-chain patterns using a multidimensional index tree

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098077

A new method to detect related function among proteins independent of sequence and fold homology.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098077

Fast prediction and visualization of protein binding pockets with PASS.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3098077

Chemical Similarity Searching

31 October 2018

1 reference

COCI

https://opencitations.net/index/coci/api/v1/citations/10.1021/CI9800211

12 September 2021

Identifiers

DOI

10.1186/1471-2105-11-47

1 reference

journals/bmcbi/XiongWBXJS10

27 July 2017

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

27 July 2017

1 reference