SeqTrim: a high-throughput pipeline for pre-processing any type of sequence read (Q33525367)

27 July 2017

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title

SeqTrim: a high-throughput pipeline for pre-processing any type of sequence read (English)

1 reference

27 July 2017

Guillermo Pérez-Trabado

object named as

Guillermo Pérez-Trabado

5

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author name string

Juan Falgueras

1

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27 July 2017

Antonio J Lara

2

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27 July 2017

Noé Fernández-Pozo

3

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27 July 2017

Francisco R Cantón

4

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27 July 2017

M Gonzalo Claros

6

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27 July 2017

20 January 2010

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27 July 2017

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27 July 2017

11

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27 July 2017

38

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https://scigraph.springernature.com/pub.10.1186/1471-2105-11-38

27 July 2017

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cites work

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EST2uni: an open, parallel tool for automated EST analysis and database creation, with a data mining web interface and microarray expression data integration

21 June 2018

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An optimized procedure greatly improves EST vector contamination removal

21 June 2018

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ESTExplorer: an expressed sequence tag (EST) assembly and annotation platform

21 June 2018

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ESTpass: a web-based server for processing and annotating expressed sequence tag (EST) sequences

21 June 2018

1 reference

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EGassembler: online bioinformatics service for large-scale processing, clustering and assembling ESTs and genomic DNA fragments

21 June 2018

1 reference

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Identifying adaptor contamination when mining DNA sequence data

21 June 2018

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ESTAnnotator: A tool for high throughput EST annotation

21 June 2018

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An optimized protocol for analysis of EST sequences

21 June 2018

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Repbase update: a database and an electronic journal of repetitive elements

21 June 2018

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Establishing a method of vector contamination identification in database sequences.

21 June 2018

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Base-calling of automated sequencer traces using phred. II. Error probabilities

21 June 2018

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Base-calling of automated sequencer traces using phred. I. Accuracy assessment

21 June 2018

1 reference

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A new DNA sequence assembly program

21 June 2018

1 reference

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LUCY2: an interactive DNA sequence quality trimming and vector removal tool.

21 June 2018

1 reference

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ESTprep: preprocessing cDNA sequence reads

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20089148

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2105-11-38

1 reference

journals/bmcbi/FalguerasLFCPC10

27 July 2017

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

1045737797

0 references

Fatcat ID

release_2uenosqwl5bznmlyc27fjmrquq

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/2uenosqwl5bznmlyc27fjmrquq

mapped directly with Wikidata item

24 November 2022

based on heuristic

PMCID

2832897

1 reference

27 July 2017

1 reference