Convergent Random Forest predictor: methodology for predicting drug response from genome-scale data applied to anti-TNF response (Q33495847)

27 July 2017

Convergent Random Forest predictor: methodology for predicting drug response from genome-scale data applied to anti-TNF response (English)

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27 July 2017

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5

Ronenn Roubenoff

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Peter K. Gregersen

6

object named as

Peter K Gregersen

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27 July 2017

Jadwiga R Bienkowska

1

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27 July 2017

Gul S Dalgin

2

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27 July 2017

Franak Batliwalla

3

1 reference

27 July 2017

Normand Allaire

4

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27 July 2017

John P Carulli

7

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27 July 2017

20 August 2009

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27 July 2017

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27 July 2017

94

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27 July 2017

423-432

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27 July 2017

6

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A human breast cell model of preinvasive to invasive transition.

27 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4476397

Increased Goodpasture antigen-binding protein expression induces type IV collagen disorganization and deposit of immunoglobulin A in glomerular basement membrane

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4476397

Insulin growth factor-binding protein 2 is a candidate biomarker for PTEN status and PI3K/Akt pathway activation in glioblastoma and prostate cancer

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4476397

Predicting interpretability of metabolome models based on behavior, putative identity, and biological relevance of explanatory signals

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4476397

Histone deacetylase inhibitors induce antigen specific anergy in lymphocytes: a comparative study

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4476397

The MicroArray Quality Control (MAQC) project shows inter- and intraplatform reproducibility of gene expression measurements

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4476397

Concordance among gene-expression-based predictors for breast cancer

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4476397

Recursive SVM feature selection and sample classification for mass-spectrometry and microarray data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4476397

Coordinated changes of histone modifications and HDAC mobilization regulate the induction of MHC class II genes by Trichostatin A.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4476397

Gene selection and classification of microarray data using random forest.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4476397

The Disease Activity Score and the EULAR response criteria

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4476397

ROCR: visualizing classifier performance in R

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4476397

Tumor classification by tissue microarray profiling: random forest clustering applied to renal cell carcinoma

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4476397

Outcome signature genes in breast cancer: is there a unique set?

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4476397

Joint classifier and feature optimization for comprehensive cancer diagnosis using gene expression data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4476397

Joint analysis of two microarray gene-expression data sets to select lung adenocarcinoma marker genes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4476397

Prediction of clinical drug efficacy by classification of drug-induced genomic expression profiles in vitro

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4476397

Gene expression profiling predicts clinical outcome of breast cancer

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4476397

Molecular classification of cancer: class discovery and class prediction by gene expression monitoring

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4476397

Characterization of a novel type of serine/threonine kinase that specifically phosphorylates the human goodpasture antigen

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4476397

Experimental comparison and cross-validation of Affymetrix HT plate and cartridge array gene expression platforms.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4476397

HIF-1alpha and CA IX staining in invasive breast carcinomas: prognosis and treatment outcome.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4476397

Histone deacetylase activities are required for innate immune cell control of Th1 but not Th2 effector cell function.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4476397

Evaluation of DNA microarray results with quantitative gene expression platforms

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4476397

Global histone modification patterns predict risk of prostate cancer recurrence

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4476397

Gene Selection for Cancer Classification using Support Vector Machines

31 October 2018

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2009.08.008

Identifying Important Risk Factors for Survival in Kidney Graft Failure Patients Using Random Survival Forests

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2009.08.008

OligoSpawn: a software tool for the design of overgo probes from large unigene datasets.

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2009.08.008

Summaries of Affymetrix GeneChip probe level data

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2009.08.008

Gene expression correlates of clinical prostate cancer behavior

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2009.08.008

Treatment response to a second or third TNF-inhibitor in RA: results from the South Swedish Arthritis Treatment Group Register

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2009.08.008

Comparison of gene sets for expression profiling: prediction of metastasis from low-malignant breast cancer

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2009.08.008

Validation of rheumatoid arthritis improvement criteria that include simplified joint counts

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FJ.YGENO.2009.08.008

10.1016/J.YGENO.2009.08.008

7 January 2021

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DOI

1 reference

27 July 2017

1 reference

27 July 2017

1 reference