Identification of novel reference genes using multiplatform expression data and their validation for quantitative gene expression analysis (Q33479558)

27 July 2017

Identification of novel reference genes using multiplatform expression data and their validation for quantitative gene expression analysis (English)

1 reference

27 July 2017

Mi Jeong Kwon

1

1 reference

27 July 2017

Ensel Oh

2

1 reference

27 July 2017

Seungmook Lee

3

1 reference

27 July 2017

Mi Ra Roh

4

1 reference

27 July 2017

Si Eun Kim

5

1 reference

27 July 2017

Yangsoon Lee

6

1 reference

27 July 2017

Yoon-La Choi

7

1 reference

27 July 2017

Yong-Ho In

8

1 reference

27 July 2017

Taesung Park

9

1 reference

27 July 2017

Sang Seok Koh

10

1 reference

27 July 2017

Young Kee Shin

11

1 reference

27 July 2017

language of work or name

English

0 references

publication date

7 July 2009

1 reference

27 July 2017

1 reference

27 July 2017

4

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27 July 2017

7

1 reference

27 July 2017

e6162

1 reference

Creative Commons Attribution 4.0 International

27 July 2017

start time

7 July 2009

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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Expression profiling of archival renal tumors by quantitative PCR to validate prognostic markers.

21 June 2018

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Identification of novel universal housekeeping genes by statistical analysis of microarray data

21 June 2018

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Selection of control genes for quantitative RT-PCR based on microarray data

21 June 2018

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Genome-wide identification and testing of superior reference genes for transcript normalization in Arabidopsis

21 June 2018

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The implications of using an inappropriate reference gene for real-time reverse transcription PCR data normalization

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703796

Evaluation of the similarity of gene expression data estimated with SAGE and Affymetrix GeneChips

21 June 2018

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Real-time RT-PCR normalisation; strategies and considerations.

21 June 2018

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A multigene assay to predict recurrence of tamoxifen-treated, node-negative breast cancer

21 June 2018

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Normalization of gene expression measurements in tumor tissues: comparison of 13 endogenous control genes.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703796

Reference genes identified in SH-SY5Y cells using custom-made gene arrays with validation by quantitative polymerase chain reaction

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703796

Quantitative gene expression profiling in formalin-fixed, paraffin-embedded tissues using universal bead arrays

21 June 2018

1 reference

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The FunCat, a functional annotation scheme for systematic classification of proteins from whole genomes

21 June 2018

1 reference

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Selection and validation of endogenous reference genes using a high throughput approach

21 June 2018

1 reference

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Normalization of real-time quantitative reverse transcription-PCR data: a model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets

21 June 2018

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Statistical modeling for selecting housekeeper genes

21 June 2018

1 reference

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An evaluation of new criteria for CpG islands in the human genome as gene markers

21 June 2018

1 reference

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Guideline to reference gene selection for quantitative real-time PCR

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703796

SAGE is far more sensitive than EST for detecting low-abundance transcripts

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703796

Human housekeeping genes are compact

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703796

Assumption-free analysis of quantitative real-time polymerase chain reaction (PCR) data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703796

Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes

21 June 2018

1 reference

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Control genes and variability: absence of ubiquitous reference transcripts in diverse mammalian expression studies

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703796

A compendium of gene expression in normal human tissues

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703796

Beta-actin--an unsuitable internal control for RT-PCR.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703796

Determinants of CpG islands: expression in early embryo and isochore structure

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703796

Effect of experimental treatment on housekeeping gene expression: validation by real-time, quantitative RT-PCR.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703796

Absolute quantification of mRNA using real-time reverse transcription polymerase chain reaction assays

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703796

Detection of gene amplification in archival breast cancer specimens by laser-assisted microdissection and quantitative real-time polymerase chain reaction

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703796

Housekeeping genes as internal standards: use and limits

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703796

Direct comparison of GAPDH, beta-actin, cyclophilin, and 28S rRNA as internal standards for quantifying RNA levels under hypoxia.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703796

High density synthetic oligonucleotide arrays

21 June 2018

1 reference

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CpG islands as gene markers in the human genome.

21 June 2018

1 reference

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Gene expression studies in prostate cancer tissue: which reference gene should be selected for normalization?

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703796

Limited agreement among three global gene expression methods highlights the requirement for non-global validation.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703796

Selection of candidate housekeeping controls in tomato plants using EST data

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703796

Quantitative real-time reverse transcription polymerase chain reaction: normalization to rRNA or single housekeeping genes is inappropriate for human tissue biopsies.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703796

Ribosomal 18S RNA prevails over glyceraldehyde-3-phosphate dehydrogenase and beta-actin genes as internal standard for quantitative comparison of mRNA levels in invasive and noninvasive human melanoma cell subpopulations

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703796

Comparison of human adult and fetal expression and identification of 535 housekeeping/maintenance genes

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703796

Identification and validation of endogenous reference genes for expression profiling of T helper cell differentiation by quantitative real-time RT-PCR

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19584937

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Equivalence test in quantitative reverse transcription polymerase chain reaction: confirmation of reference genes suitable for normalization

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19584937

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Housekeeping gene variability in normal and cancerous colorectal, pancreatic, esophageal, gastric and hepatic tissues

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19584937

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0006162

1 reference

27 July 2017

0 references

1 reference

27 July 2017

1 reference